Ailuropoda melanoleuca (giant panda): 100482041
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Entry
100482041 CDS
T01329
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100482041 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aml03400
]
100482041 (APEX1)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100482041 (APEX1)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100482041 (APEX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
100482041
NCBI-ProteinID:
XP_002929556
Ensembl:
ENSAMEG00000005418
UniProt:
D2I2U8
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All DBs
Position
20:579654..582814
Genome browser
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGF
GELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgtgggaaaaagggagctgtggcagaagacggggaagaacccaagattgag
ccagaagccaagaagagtaaggcgggagcaaagaaaaacgaaaaagaggcagcaggagag
ggatcagtcctgtatgaggaccccccagatcagaaaacctcgcccagtggtaaatcggcc
accctcaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggt
ttagattgggtaaaggaagaagccccagatatcctctgcctccaagaaaccaaatgttca
gagaacaaactaccagctgaacttcaagagttatctggcctatcccatcagtactggtca
gctccttcagacaaggaagggtacagtggtgtgggcctgctctcccgccagtgcccactc
aaagtctcctatggcatcggtgaggaggaacatgatcaggaaggccgagtgattgtggct
gaatttgatgcatttgtcctggtaacagcctatgtacctaatgcaggccgaggtctggta
cgcttggagtaccggcagcgctgggatgaagcctttcgcaaattcctgaagggtttggct
tcccgtaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaatcgacctt
cgcaaccccaagggaaacaaaaagaatgctggcttcactccacaagagcgtcaaggcttt
ggggaattactacaggccgtgccactggctgacagtttccggcacctgtaccccaacaca
gcctatgcctataccttttggacctacatgatgaatgctcgatccaaaaatgtcggttgg
cgccttgattactttttgttgtctcactctctcttacctgcattgtgtgacagcaagatc
cgttccaaggccctgggcagtgaccactgtcctatcaccctatacttagcactgtga
DBGET
integrated database retrieval system
