Ailuropoda melanoleuca (giant panda): 100482238
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Entry
100482238 CDS
T01329
Symbol
RIN1
Name
(RefSeq) ras and Rab interactor 1 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100482238 (RIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100482238 (RIN1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100482238 (RIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
RA
Motif
Other DBs
NCBI-GeneID:
100482238
NCBI-ProteinID:
XP_002916661
Ensembl:
ENSAMEG00000017107
UniProt:
D2H4M3
G1MFE5
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All DBs
Position
16:complement(84921993..84929109)
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AA seq
789 aa
AA seq
DB search
METPGEPGAGPLGAPSLSNFAPGRPEREKPAVDPPYDVPGASEQQAGGPQRPGRSVSLRE
RLLLTRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRGCQALCVRLPEAGGPSFVSSH
YVQESPGGVSLEGSELMFPDLVQLICAYCHTRDILLLPLQLPRAICQAATHKELEAISHL
GIEFWSSSLNTKAQPGLSEGQLLPRLKPRSPQELDQGTGAALCFFNPLFPGDLGPTKREK
FKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGAAPNQTESLPPRQLLRRESSVGYRVPGG
ARPGLPPLPSLQEVDCGSPSSSEEEGALGPRGSPATSPNLGRRRPLLRSMSAAFCSLLAP
ERLVGRAAMALMQDRHTAVGQLVQDLLTQVRAGPEPRELQGVREALSRARAMLSTELSPE
KLLPPQRLEHVLEKSLHRSVLKPLRPILAARLRRRLSANGSLGRLAEGLRLARAQGPGAF
GSHVSLPSPVEMEQVRQKLLQLLRAYSPSAQVKRLLQACKLLYTALRTHAGEGAGADEFL
PLLSLVLAQCDLPELLLEAEYMSELLEPTLLTGEGGYYLTSLSASLALLSGLDQAHTLPL
SPSQELQRSLSLWEQRRLPATHSFQHLLRVAYQDPSSGCTSKTLAVPPGASIATLNQLCA
TKFRVTQPDTFGLFLYKEQGYHRLSPGALAHRLPTTGYLVYRRAERPETQRASPGATPDF
GSGEPEAGGREEEKGGWGVGDIEVKAGPGDRRGESETMAERAKEGMGLARGDPAQPGGPE
AEGSQAAEE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccctggggagccaggagctggacctctcggagcccccagcctgtccaacttc
gcacctgggcgcccggagagagaaaagcccgctgtggacccgccgtacgacgtgcccggg
gccagcgagcagcaggcgggcgggccccagcggcctgggcgcagtgtgagcctgcgggag
cgcctgctgctcacgaggcctgtgtggctgcagctgcgggccaacgctgccgccgcgctg
cacgtgctaaggactgagcccccggggacgttcctggtgcggaagtctaacacccgcggg
tgccaggccctgtgcgtgcggctgcccgaggccggcggcccctcctttgtctctagccac
tacgtccaggagagccctgggggtgtctccttggagggctcagagctcatgttcccagac
ctggtccagctcatctgcgcctactgccatacccgggacatccttctcctcccactccag
ctccccagagccatctgccaggcagccacccacaaggaactggaagccatctcccatctg
ggcattgagttctggagctcctccctcaacaccaaggctcagccgggcctttctgaaggc
cagctgctgccccggctgaagccccgctccccacaagagctggaccagggcacaggagct
gccctgtgcttcttcaatcccctgttcccaggggacctgggccccaccaagcgggagaaa
ttcaagaggagcttcaaagtgcgtgtgtccacggagacctccagccctctgtcaccacct
gccgtgccacctcccccggtccccgtgctgccaggtgcagcccccaaccagacagaaagc
ttaccccctcgccagcttctgcgaagggagagctcagtggggtaccgtgtgcctgggggc
gccaggccaggcctcccacccctgccctccctccaggaggtagactgcggctcccccagc
agctccgaagaggagggggcgctggggccccggggaagcccagcgacctcccccaacctg
ggccgccggcggcccctgcttcggtccatgagcgctgccttctgctccctgctggcgccc
gagcggctggtgggccgggcagccatggcgctgatgcaggaccgacacacggctgtgggc
cagctggtgcaggacctactgacccaggtgcgggctggccctgagccccgggagctgcag
ggtgtccgagaggcactgagccgggcgcgggccatgctgagcacagagctgagccctgag
aagctgctgccgccccagagactggagcatgtcttggagaagtcgctgcatcgctccgtg
ctcaagcctctccggcccatcctggcagcccgcctgcggcgccggctttccgccaatggc
tccctgggccgcctggctgaaggcctccgcctggcccgggcccagggccctggagccttc
gggtcccatgtgagcctgccctccccggtggagatggaacaggtgcgccagaagctgcta
cagctgctccgggcttactctcccagcgcccaggtcaagcggctcctgcaggcttgcaag
ctgctctacacggccctgaggacccacgcgggggagggtgcgggggccgatgagttcctc
ccgctgctaagcctggtcctggcccagtgcgaccttcccgagctgctgctggaggccgag
tacatgtcagagctgctggagcccaccctgctcaccggagagggtggttactacctgacc
agcctctcggccagcctggccctgctcagtggcctggaccaggcccacacgctccccctg
agcccgtcccaggagctgcagcgctccctcagcctctgggagcagcgccgcctgcccgcc
acgcacagcttccagcacctcctccgagtagcctaccaggacccgagcagtggctgcacc
tccaagaccctggctgtgcccccaggggcctcgattgccaccctgaaccagctctgtgcc
accaagttccgagtgacccagcccgatacatttggcctcttcctgtacaaggagcagggc
taccaccgcctatcccctggagccctggcccacaggctccccacgaccggctaccttgtc
tatcgcagggccgaaaggcctgagacccagagggcctcaccgggggctaccccggatttt
ggcagcggagagccagaggcagggggcagggaggaggagaaagggggctggggagttggg
gacattgaggtcaaagccggtcctggggacaggaggggagagtctgagaccatggctgaa
agggccaaggaggggatgggcctcgcaaggggggaccccgctcagccaggggggccagag
gctgagggaagccaggcagcagaggagtag
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