KEGG   Ailuropoda melanoleuca (giant panda): 100482395
Entry
100482395         CDS       T01329                                 
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
  KO
K13126  polyadenylate-binding protein
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03015  mRNA surveillance pathway
aml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100482395 (PABPC5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100482395 (PABPC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100482395 (PABPC5)
   03041 Spliceosome [BR:aml03041]
    100482395 (PABPC5)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100482395 (PABPC5)
   mRNA cycle factors
    Stress granule specific factors
     100482395 (PABPC5)
Spliceosome [BR:aml03041]
 Complex C
  Other components
   Complex C specific factors
    100482395 (PABPC5)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_10 RRM_3 RBD_DEAH11 DUF4523 ATP-grasp_2
Other DBs
NCBI-GeneID: 100482395
NCBI-ProteinID: XP_011235460
Ensembl: ENSAMEG00000020114
UniProt: G1MP66
LinkDB
Position
X:65011586..65016941
AA seq 382 aa
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETIDDEKLKEEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDE
MNGRTVGSKPLHVTLGQARRRW
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggggagtggagagcctaatcctgctggcaagaaaaagaagtacctaaaggctgccctg
tacgtgggtgacttggacccagatgtcacggaggacatgctatataaaaagttcaggcct
gctggccctctgcgcttcacccgaatctgccgtgaccccgtgacccgcagccccctgggc
tatggttatgttaacttccgctttcctgcagatgctgagtgggccctgaataccatgaat
tttgatttgattaatggcaaacctttccgcctcatgtggtctcagccagatgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatgcatagacaatagg
gcccttttttatttattttctgcttttgggaacattctctcctgcaaggtcgtatgtgat
gacaatggctctaagggttatgcctatgtgcactttgacagcctggccgctgccaataga
gccatctggcacatgaatggagtgcggcttaacaaccgccaggtgtatgttggcagattc
aaattcccagaagagcgggcagctgaagtcagaaccagggatagagcaactttcaccaat
gtttttgttaaaaactttggagatgacatggatgatgaaaaactgaaggaaatctttagt
ggatatgggccaactgagagtgttaaggtaataagagatgccagtgggaaatctaagggc
tttggatttgtgaggtatgagacacacgaggctgcccaaaaggctgtattagacctgcat
ggaaagtccatcaatgggaaagttctatatgtagggcgagcacagaagaaaattgaacga
ttggctgagttaagacgaagatttgaacggctgagattaaaagaaaaaagtcggcctccg
ggggtgcctatctatattaagaacctggatgagaccatcgatgatgagaaactgaaggag
gaattttcttcctttggatcaattagccgggccaaagtgatggtggaagtagggcaaggc
aaagggtttggtgttgtttgcttctcctcttttgaagaagctaccaaagcagtggatgag
atgaatggtcgcacagtgggctccaagcccctgcatgtaaccctgggccaggccaggcgc
aggtggtga

DBGET integrated database retrieval system