Ailuropoda melanoleuca (giant panda): 100482495
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Entry
100482495 CDS
T01329
Symbol
SHANK3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100482495 (SHANK3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
100482495
NCBI-ProteinID:
XP_034499592
Ensembl:
ENSAMEG00000024952
LinkDB
All DBs
Position
15:<91499199..91547576
Genome browser
AA seq
1650 aa
AA seq
DB search
GGAGSGAWAPEPRTPTGAPGTWCPAPGRARPVRAHPVRTHEPAPPQKCLRLDPAAPVWAA
KQRVLCALNHSLQDALNYGLFQPPSRGRAGKFLDEERLLQEYPPNLDTPLPYLEFRYKRR
VYAQNLIDDKQFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDTGECPLSL
AAQLDNATDLLKVLRNGGAHLDFRTRDGLTAVHCATRQRNAAALTTLLDLGASPDYKDSR
GLTPLYHSALGGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGAD
MGAQNASGNTALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVI
KTHKDSDVVPFRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGEVQPAASPGPSLRS
LPHQLLLQRLQEEKDRDRDGDQENDIGGPTAGRGSQSKIRLQGCLSSSKSPQFSPEAFAC
PMDFLRVGQPVAKRINFGMFQFCRNKSLPTSPPPSVRCSAPRPVASPARKLYSAVPGRKF
IAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCVEEVQMRQYDTR
HETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAVLQKRDHEGFGFVLRGAKAETPIE
EFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQVVALIRQGGNR
LVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELASIRRRKGEKLDE
ILAAAAEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSLRKG
IPRTKSVGEDEKLASLLEGRFPRSTSMQDPVREGRGIPPPPQTAPPPPPAPYYFDSGPPP
AFSPPPPPGRAYDTVRSSFKPGLEARLGAGAAGLYDSGAPLGPLPYPERQKRARSMIILQ
DSAPEVGDAPRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASIFAPSKPQRRKSPLVK
QLQVEDAQERAALAVGSPGPVGGSFAREPSPTHRGPRPSGLDYGPADSPGLAFGGPGPAK
DRRLEERRRSTVFLSVGAIEGSPPSADLPSLQPSRSIDERLLGTGPTTGRDLLLPSPVSA
LKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQAPSRSPTPVHSPDA
DRPGPLFVDVQARDSERGALASPAFSPRSPAWVPVPARREPEKAPREERKSPEDKKSMIL
SVLDTSLQRPAGLIVVHATSNGQEPSGLGAEEERPGTPELAPAPPQSAVVAEPLASPRAQ
PPGSTPPTDSGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEEFANG
VLLATPLPGPGPSPTTVPGPASGKPSSEPPPAPESAADSGVEEADTRSSSDPHLETTSTI
STVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDPLLKQ
SSDSELMAQQHHAASAGLASAAGPARPRYLFQRRSKLWGDPMESRGLPGPEDDKPTVISE
LSSRLQQLNKDTRSLGEEPAGGLGGLLDPAKKSPIAAARLFSSLGELSSISAQRSPGGPG
GGASYPVRPGGRYPVARPGFSPLFRTAAAP
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
ggaggcgcggggtccggggcttgggctcccgagccccggactcctacgggggctcccggg
acttggtgccctgcgccgggccgggcgcggccggtccgcgctcacccggtccgcactcat
gagcccgctccgccgcagaagtgtctgcgcctggacccggccgcgcccgtgtgggccgcc
aagcagcgcgtgctctgcgccctcaaccacagcctccaggacgcgctcaactacgggctc
ttccagccgccctcccggggccgcgccggcaagttcctggacgaggagcggctcctgcag
gagtacccgcccaacctggacacgcccctgccctacctggagtttcgatacaagaggcga
gtttatgcccagaacctcattgatgataagcagtttgcaaagcttcacacaaaggcaaac
ctgaagaagttcatggattacgtccagctgcacagcacggacaaggtggcccgcctactg
gacaaggggctggaccccaatttccacgatcctgacacaggagagtgtcctctgagcctt
gcggcccagctggacaatgccacggacctgctgaaggtgttgaggaatggcggtgctcac
ctggacttccgcactcgagatgggctcactgctgtgcactgtgccacgcgccaacggaat
gcggcagctttgacgaccctgctggacctgggcgcttcacctgactacaaggacagccgc
ggcctgacgcccttgtaccacagtgccctggggggcggggatgccctctgctgtgagctg
cttcttcacgaccatgctcagctggggaccacagatgagaacggctggcaggagatccac
caggcctgccgctttgggcatgtgcagcacctggaacacctgctgttctacggagctgac
atgggggctcagaacgcctcagggaacacagccctgcacatctgtgccctttataaccag
gagagctgtgctcgagtcctgcttttccgtggagctaacaaggatgtccgcaattacaat
agccagacagccttccaggtggccatcatcgcagggaactttgagctcgcagaggtcatc
aaaacccataaagactcagatgttgtaccattcagggaaacccccagttatgcaaagcgg
cggcggttggctggccccagtggcctggcctcccctcggcccctgcagcgctcagccagt
gacatcaacctgaagggtgaggtgcaaccggcagcttctcctggaccctcgctgcgaagc
ctcccccatcagctgctgctccagcggctgcaggaggagaaagaccgagatcgggatggt
gaccaagagaatgacatcggtggccccacagcaggcaggggcagccagagcaagatcaga
ctccaaggctgtctgtcttcctccaaatcacctcagttctcccctgaagcttttgcatgt
cccatggatttcttaagggtaggacagccagtggctaaaagaataaactttgggatgttt
cagttttgcagaaacaaaagccttccgacctctcctccgccctccgtgcgctgcagtgcc
cctcgcccggtggcctctcccgcgcggaaactttacagcgccgtccccggccgcaagttc
atcgccgtgaaggcgcacagcccgcagggcgagggcgagatcccgctgcaccgcggcgag
gccgtgaaggtgctcagcattggggagggcggtttctgggaggggaccgtgaaaggccgc
acgggctggttcccggccgactgcgtggaagaggtgcagatgagacagtatgacacacgg
cacgaaacccgggaggaccggacgaagcgccttttccgccactacacagtgggctcctat
gacagcctcacttcacacagtgattatgtcattgacgacaaggtggctgtcctgcagaaa
cgggaccatgagggcttcggttttgtgctccgcggagccaaagcagagacccccatcgag
gagttcacgcccacgcccgccttccctgcgctccagtaccttgagtcggtggatgtggag
ggtgtggcctggagggcggggctgcgcacgggagacttcctcatcgaggtgaacggggtg
aacgtggtgaaggtcgggcacaagcaggtggtggctctgatccgccagggcgggaaccgg
ctcgtcatgaaggttgtgtctgtgacgaggaagccggaagaagatggggctcggcgcaga
gccccgccgccccccaagagggcccccagcaccacgctgaccctgcgctccaagtccatg
acagctgaacttgaggaacttgcctccattcggagaaggaaaggggagaaactggatgag
atcctggcagccgccgcggagcctacactgaggccagacatcgcagacgctgactcaaga
gccgccactgtcaaacagcggcccacaagtcggaggatcaccccagctgagatcagttct
ttgtttgagcgccagggcctcccaggcccagaaaagctgcccggctccctgcggaagggg
attcctcggaccaagtctgtaggggaggatgaaaagctggcgtccctgctggagggacgc
ttcccaaggagtacatcgatgcaagatcccgtgcgcgagggccgtggcatcccgcccccg
ccgcagaccgcgccgccacccccacccgctccctactactttgactctgggccgcccccc
gccttctcgccgccgccccctccaggccgcgcctacgacacagtgcgctccagcttcaaa
cccggcctggaagcgcgcctgggcgccggggccgctggcctgtatgactccggcgcgccc
ctgggtccgctgccctaccccgagcggcagaagcgtgcgcggtccatgatcatcctgcag
gattctgcgccggaggtgggcgatgccccccggccccctcccgcagccaccccaccagag
cgtcccaagcgtaggccgaggccaccaggtcccgacagtccctatgccaacctgggcgcc
ttcagcgccagcatcttcgcgccttccaagccgcagcgccgcaagagcccgctggtgaag
cagctgcaggtggaggatgcccaggagcgcgcagccctggccgtgggcagccctggccca
gtcggcggcagtttcgcccgcgagccctccccgacgcaccgcggaccgcggccaagcggt
cttgactacggccctgcggacagccccggcctcgcgtttggtggcccaggtccggccaag
gaccggcggctggaggagcggcgccgctccaccgtgttcctatcggtgggagccatcgag
ggcagccctcctagcgcggacctgccctccctgcagccctcccgctccatcgatgagcgc
cttctggggaccggccccaccaccggccgcgacctgctcctgccttcccccgtctctgct
ctgaagccattggtcagcggccccagccttgggccttcaggctccaccttcatccacccg
ctcaccggcaaacccctggaccccagctctcccctggccctcgccctggctgcccgtgag
cgggctctggcctcccaggcaccctcccggtcccctacgcctgtgcacagtcctgatgca
gaccgccctgggcctctgtttgtggatgtacaggcccgcgactctgagcgaggggccctg
gcctccccagccttctccccaaggagcccggcctgggttcctgtgcctgctcgcagggag
ccggagaaagcaccccgggaggagcgtaagtcgccggaggacaagaagtccatgatcctc
agcgtcctggatacatccctgcagcggccagccggcctcatcgttgtgcatgccaccagc
aatgggcaggagcccagcgggctgggggctgaagaggagcgtccaggcaccccagagctg
gccccggcccccccacagtcagcagtggtggcagagcccctggctagcccccgggctcag
ccccctggcagcacccctccaacagactctgggccaggccagggcagctccgaggaggag
ccagagctggtatttgctgtgaacttgccgcctgcccagctgtcctccagtgatgaggag
accagggaggagctggcccgcattgggctggtgccgcctcctgaagagtttgccaatggg
gtcctgctggccaccccacttcctggcccaggtccctcgcccaccacggtgccaggcccg
gcctcagggaagccgagcagcgagccaccccctgcccccgagtctgcggccgactcaggg
gtggaggaggctgacacacgcagctctagcgacccccacctggagaccacaagcaccatc
tccacggtgtccagcatgtccaccctgagctcggagagtggggaactcaccgacacccac
acctccttcgccgatggacacacttttctactcgagaagccaccagtgcctcccaaaccc
aagctcaagtccccgctggggaaggggccggtgaccttcagggacccgctgctgaagcag
tcctcggacagcgagctcatggcccagcagcaccatgccgcctctgctgggttggcctcc
gctgccggacctgctcgccctcgctacctcttccagagaaggtccaagctgtggggggac
cccatggagagccgggggctccctgggcccgaagatgacaaaccaactgtgatcagtgag
ctcagctcccgcctgcagcagctgaacaaagacacacgctccttgggggaagagccggct
ggtggcctgggcggtctgctggacccggccaagaagtcgcccatcgcggcagctcggctc
ttcagcagcctcggtgagctgagctccatctcagcgcagcgcagccccgggggcccgggc
ggcggggcctcctacccggtgcggcccggcggccgctaccccgtggcgcggccaggcttc
tcacctctcttccggacggctgctgcgccctga
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