Ailuropoda melanoleuca (giant panda): 100482521
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Entry
100482521 CDS
T01329
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X2
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100482521 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100482521 (CPSF3)
03019 Messenger RNA biogenesis [BR:
aml03019
]
100482521 (CPSF3)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100482521 (CPSF3)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100482521 (CPSF3)
U7-dependent histone pre-mRNA processing factors
100482521 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100482521
NCBI-ProteinID:
XP_002923277
Ensembl:
ENSAMEG00000008493
UniProt:
G1LPK4
LinkDB
All DBs
Position
4:complement(137910739..137958027)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggaaagtgaccagctgctgatccgaccccttggagccggg
caagaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagaccagtttcaaaggaagaacatttatgactcatgctacaaaa
gctatttatagatggcttctttcagattatgtcaaagtcagtaatatatcagcagatgac
atgctgtatacagagacggatctggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcaggccacgttcta
ggagctgccatgttcatgattgagatcgcgggcgtgaagctcttgtacacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcctaatattaaacctgatatt
cttattattgaatctacttacgggacccatatccatgagaagcgtgaagagcgagaagca
agattctgtaacactgttcatgacattgtgaacagagggggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattttagatgagtactggcagaatcac
ccagaactccatgatattcccatatactacgcgtcatctttggccaagaagtgcatggca
gtgtaccagacgtatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaagcatattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagcgttgtcatggcctccccaggcatgatgcagagtggcttatccagagagctc
tttgaaagctggtgcacagataagaggaacggtgtcattatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgagccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaacgaaatggccagattgaaagcagccctgattcgagaatatgaggacaacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgaccttgaatttcagagga
gaaaagctagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccctatact
ggtccttttaatttgctctattaccagcttcagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtattcaaaaatattactgtcatacaggagcca
ggaatggtggtattagaatggctggcgaacccttccaatgatatgtatgcagatacagta
acaactgtgatactggaagtccagtccaacccgaaaataaggaaaggtgcggtacagaag
gtttctaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgctccaggac
atatttggagaagactgtgtcagtgtaaaagatggttctgttctcagtgtcacagtggac
gggaaaactgctaatataaacttggagacacggacggtggagtgcgaagagggaagcgag
gatgacgaatccctgcgggaaatggtggagctggccgcgcagaggctgtatgaggccctc
acccccgttcactga
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integrated database retrieval system
