Ailuropoda melanoleuca (giant panda): 100482579
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Entry
100482579 CDS
T01329
Symbol
LMX1B
Name
(RefSeq) LIM homeobox transcription factor 1-beta
KO
K09371
LIM homeobox transcription factor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100482579 (LMX1B)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
100482579 (LMX1B)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Dppa2_A
HTH_32
Motif
Other DBs
NCBI-GeneID:
100482579
NCBI-ProteinID:
XP_002916367
Ensembl:
ENSAMEG00000023595
UniProt:
A0A7N5K9U4
LinkDB
All DBs
Position
7:52059528..52140592
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AA seq
395 aa
AA seq
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MDIATGPESLERCFPRGQTDCAKMLDGIKMEEHALRPGPATLGVLLGSDCPHPAVCEGCQ
RPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCME
KIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYEKEKDLLSSVS
PDESDSVKSEDEDGDMKPAKGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEV
SSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVLSS
RMEGMMASYTPLAPPQQQIVAMEQSPYGSSDPFQQGLTPPQMPGNDSIFHDIDSDTSLTS
LSDCFLGSSDVGSLQARVGNPIDRLYSMQSSYFAS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcaacaggtcccgagtcgctggagaggtgcttcccccgcgggcagacggat
tgcgccaagatgctggacggcatcaagatggaggagcacgccctgcgccccgggcccgcc
actctgggggtgctactgggctccgactgcccgcatcccgccgtctgcgagggctgccag
cggcccatctccgaccgcttcctgatgcgagtcaacgagtcgtcctggcacgaggagtgt
ttgcagtgcgcggcgtgtcagcaagccctcaccaccagctgctacttccgggatcggaaa
ctgtactgcaaacaagactaccaacagctcttcgcagccaagtgcagcggctgcatggag
aagatcgcccccacagagttcgtgatgcgggcgctggaatgtgtgtaccacctgggctgc
ttctgctgctgcgtgtgcgagcggcagctccgcaagggcgacgagtttgtgctcaaggag
ggccagctgctgtgcaagggggactacgagaaggagaaggacctgctcagctccgtgagt
cccgacgagtccgactctgtaaagagcgaggacgaggatggggacatgaagccggccaag
gggcagggcagccagagtaaaggcagtggggacgacgggaaggacccccggaggcccaag
cgaccccggactatcctcaccacgcagcagcgaagagccttcaaggcctcctttgaggtg
tcctccaagccctgccgaaaggtccgcgagacgctggcagcagagacgggcctcagcgtg
cgcgtggtccaagtctggtttcagaaccaaagagccaagatgaagaagttggcacggcgg
caccagcagcagcaggagcagcagaactcccagcggctgggccaagaggtcctgtcgagt
cgcatggagggcatgatggcctcctacacgccattggcccccccacaacagcagatcgtg
gccatggagcagagtccctacggcagcagcgaccctttccagcagggcctcacgccgccc
caaatgccagggaacgactccatcttccacgacatcgacagcgatacctccttaaccagc
ctcagcgactgcttcctcggctcctcggacgtgggctccctgcaggcccgcgtggggaac
cccatcgaccggctctactccatgcagagttcctacttcgcctcctga
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