Ailuropoda melanoleuca (giant panda): 100482729
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Entry
100482729 CDS
T01329
Symbol
SMO
Name
(RefSeq) smoothened homolog isoform X1
KO
K06226
smoothened
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04340
Hedgehog signaling pathway
aml04360
Axon guidance
aml05200
Pathways in cancer
aml05205
Proteoglycans in cancer
aml05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100482729 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100482729 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100482729 (SMO)
05205 Proteoglycans in cancer
100482729 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
100482729 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
aml04030
]
100482729 (SMO)
G protein-coupled receptors [BR:
aml04030
]
Frizzled / Smoothened family
100482729 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
100482729
NCBI-ProteinID:
XP_034527770
Ensembl:
ENSAMEG00000005185
UniProt:
G1LF15
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Position
1:189900206..189920222
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AA seq
788 aa
AA seq
DB search
MAAARLARGPEILLLGLLLLLLGGPGRGAALSGNATGPGPRSAGGSARRSAAVTGPPPLL
SHCGRSAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAV
IQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDRFPEGCPNE
VQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGALT
GLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTM
RLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKAT
LLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEKANLWLVEAEI
SPELEKRLGRKKKRRKRKKEVCPLVPPPELHHPAPAPATSAVPRLPQLPRQKCLVAAGAW
GAGESCRQRAWTLVSNPFCPEPGPLRDPFLPSAAVPTAWAQGCRQGLGPVHSRTNLMEAE
LVDADSDF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcccgcctcgcacgggggccggagatcctgctcctggggctgctgctgctg
ctgttggggggcccgggccggggggcggccttgagcgggaacgcgactgggcctgggccg
cggagcgcgggcgggagcgcaaggaggagcgcggccgtgaccggccctccgccgctgctg
agccactgcggccgctcagccccctgcgagccgctgcgctacaacgtgtgcctgggctcg
gcgctgccctacggggccacctccacgctgctggccggggactcggactcccaggaagaa
gcgcacggcaagctcgtgctctggtcgggcctccggaacgccccccgctgctgggcagtg
atccagcccctgctgtgtgctgtgtacatgcccaaatgcgagaatgaccgggtggagctg
cccagccgcaccctctgccaggctacccgaggcccctgtgccatcgtggagagggagcgc
ggctggcctgacttcctgcgctgtacccccgaccgcttccccgagggctgcccgaatgag
gtgcagaacatcaagttcaacagttcgggccagtgcgaggctcccttggttcggactgac
aaccccaagagctggtatgaggacgtggagggatgtgggatccagtgtcagaacccgctg
ttcaccgaggccgagcaccaggacatgcacagctacatcgcagccttcggggcgctcacg
ggcctctgcacgctcttcaccctggccacgtttgtggctgactggcggaattcgaatcgc
taccctgctgtcattctcttctatgtcaacgcgtgtttctttgtggggagcattggctgg
ctggcccagttcatggatggcgcccgccgggagatcgtctgccgtgcagatggcaccatg
aggcttggggagcccacctccaatgagaccctgtcctgcgtcatcatctttgtcatcgtg
tactacgccctgatggctggtgttgtctggtttgtggtcctcacctacgcctggcacacc
tccttcaaagccctgggcaccacctaccagcctctctccggcaagacctcctacttccac
ctgctcacgtggtcactcccctttgtcctcaccgtggcaatccttgccgtggcccaggtg
gatggggactccgtaagtggcatctgttttgttggctacaagaactaccgataccgcgct
ggcttcgtcctggccccgatcggcctggtgctcatcgtgggaggttacttcctcatccga
ggagtcatgactctgttttccatcaagagcaaccatcctgggttgctgagtgagaaggct
gccagcaagatcaatgagaccatgctgcgcctgggcatttttggcttcctggcctttggc
tttgtgctcatcaccttcagctgccatttctacgacttcttcaaccaggctgagtgggag
cgcagcttccgggactatgtgttgtgccaggccaatgtgaccatcgggctgcccaccaag
aagcccatccccgactgtgaaatcaagaatcgccctagcctcctggtggagaagatcaac
ctgttcgccatgtttggaaccggcattgccatgagcacctgggtctggaccaaagccacg
ctgctcatctggaggcgcacctggtgcaggttgactgggcagagtgatgatgagcccaaa
cgcatcaagaagagcaaaatgattgccaaggccttctccaagcggcgtgagctgctgcag
aacccaggccaggaactctccttcagcatgcacactgtctcccacgatgggcctgtggcg
ggtttggcctttgacctcaatgagccctccgcagacgtgtcctctgcctgggcccagcat
gtcacgaagatggtggctcggcgaggagccatactgccccaggatgtgtctgtcacccct
gtggcaactccagtgcccccagaggaaaaagccaacctgtggttggttgaggcagagatc
tccccagagctggagaagcgcctgggccggaagaagaagcggaggaagaggaagaaggag
gtgtgccccctggtgccaccccctgagcttcaccaccccgccccggcccctgcgaccagc
gccgttcctcgcctgccgcagctgccccggcagaagtgtttggtggccgcaggtgcctgg
ggagccggggaatcctgccgacagagagcttggaccctggtctccaaccctttctgccca
gagcccggtcccctgcgggacccatttctgcccagtgccgcagttcccacggcctgggct
cagggctgccgccaggggctggggcccgttcactcccgcaccaacctgatggaggccgag
ctcgtggacgcagattcagacttctga
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