Ailuropoda melanoleuca (giant panda): 100483095
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Entry
100483095 CDS
T01329
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04014
Ras signaling pathway
aml04015
Rap1 signaling pathway
aml04024
cAMP signaling pathway
aml04520
Adherens junction
aml04530
Tight junction
aml04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100483095 (AFDN)
04015 Rap1 signaling pathway
100483095 (AFDN)
04024 cAMP signaling pathway
100483095 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100483095 (AFDN)
04530 Tight junction
100483095 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100483095 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
100483095
NCBI-ProteinID:
XP_019654679
Ensembl:
ENSAMEG00000009474
LinkDB
All DBs
Position
10:108580334..108678403
Genome browser
AA seq
1801 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDALPPKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEAVRQASDKDDRPFQGDDVENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLERRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPAEFAVAEA
LEKYGLEKENPKEYCIARVMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGVLVF
QLKRRPPDYIPKKTKKHIDGKLVKGKERAEGSGYGSALPPEKLPYLVELSPGRRNHFAYY
NYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKFDENSIQLFGSGIQPHHCDLTNMDGVVTV
TPRSMDAETYVEGQRISETTMLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTAKG
PRHKPGIVQETTFDLGGDVHSGTALPTSKSTTRLDSDRVLSASSTAERGMVKPMMRVEQQ
QDYRRQENRTQDAPGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYLA
CRYVLSSQSRADVSPAERTHKVIALVNKMVSMMEGVIQEVDQVDQTQKNIAGALAFWMAN
ASELLNFVKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSL
QRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFVNMWLFNRLVTDPESGLCSHY
WGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPDDIPNINSTCFKLN
SLQLQALLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGREVQLEEDPDLQLPFL
LPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLVPHARSPGTWTIYFEGADYESHLLRES
TELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRIS
DRRGSGKPRPKSEGFELYNNSAPNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSP
NVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFP
ASKSQDRMAPPQNQWPNYEEKPHMHPDSNHSSIAIQRVTRSQEELREDKAYQLERHQIEA
VLDRKSDSDMWIHQSSSVGSSTSSQEHLDHSSKSGTPASTLTKSGPGRWKTPAAVQPMPA
AVSQPVQTDPPPPPPPPPTHYAGDFDGIPVDLPLPPPPAGQTGPASAQAAAAERRKREEH
QRWYEKEKARLEEERDRKRREQERKLGQMRSQSLNPAPFSPVTVPHVKPEKPSTLQRPQE
TVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDM
LSREIHELQSKPERSAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQ
RLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRRQEEERTK
RDAEEKRRQEEGYYSRLEAERRRQHAEAERRLLEPEEPGLCRPPLPRGYELPSLSPPAAA
PPPPPQRTASSLQAQALSPDSVYTARLVAYHEEAAEEHCGLAGPNSYMGSAGTAVGAHDA
YRDPRERLSKSHDADLPGSPGAPENLTFRERQRLFSQGQDVSNKVKASRKLTELENELNT
K
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagctgctggaaattttgcaacaaaatgtattcgggtc
tctagtactgccaccactcaagatgtgatcgagacgctggcggagaaattccggcctgac
atgcggatgctgtcatcccccaagtactccctctatgaagtgcatgtcagtggagaagaa
agaagattggatatagatgagaagcccctagttgttcagctgaattggaataaagatgat
cgagagggcagatttgttcttaagaatgagaacgatgcccttcctcctaagaaggctcaa
agcaatggacctgagaagcaggagaaagaaggtgttatccagaacttcaagagaaccctc
tcaaagaaagaaaagaaggagaaaaagaagagagaaaaagaggcagtaaggcaggcgtct
gataaggatgataggcctttccaaggggatgacgttgagaattcccgactggctgccgag
gtttacaaagacatgcctgaaactagctttacccgaacaatttcgaatccggaggtggtc
atgaagcgtcgccggcagcagaaactagagaggaggatgcaggagttccggagctcggac
gggcggcctgactcaggtggaacattgagaatttatgcagatagtttaaaaccaaatatt
ccctacaagacaatcctgctgtctaccacagaccctgcagagtttgctgtggctgaagct
ttagagaaatacggcctggagaaggagaatcccaaggagtactgcattgcccgggttatg
cttcctcctggagcccagcattctgacgaaaaaggtgctaaagaaattatccttgatgat
gatgagtgtcctttacagatcttcagggaatggccaagtgacaaaggggttttagtcttt
cagttgaagaggagaccaccagactatatcccaaagaaaactaagaaacacatcgatggg
aagctggtgaagggcaaggagagagcagaggggtcgggctatggctccgcacttccgccc
gaaaagctgccctatctagtagagctgagcccagggagaaggaatcactttgcctactac
aactatcacacttacgaagacggctctgactccagagataagcccaagctttaccgcctt
cagttgagcgtcactgaggttgggacagaaaagttcgatgagaactccatccagctgttt
ggatcaggaattcagccccatcactgtgacctcacaaacatggatggggttgtcactgtc
acgccaagaagcatggatgctgagacttatgtggaaggacagcgcatctcagagacaacc
atgctgcaaagtggaatgaaagtgcagttcggggcatcacacgtgttcaagtttgtggac
cccagccaggaccacgctctggcaaagagatctgtggatggaggcctgacagccaagggt
cccagacataagcctggaattgttcaagagacaacttttgatttaggaggagatgttcat
agtggaacagcactgccaacaagcaagagcaccacgaggctggacagcgacagggtgttg
tctgcctccagcacggcggagcgcgggatggtgaagccaatgatgagagtagaacagcag
caggattaccgcaggcaagaaaacagaactcaggacgcccctgggcctgaactgatactg
cctgcaagcattgaattcagggaaagttctgaagattcatttttatctgccattataaat
tatactaatagctctaccgtccattttaagttgtcacctacatatgtattgtatctggca
tgtcggtatgtattgtccagccagtccagagctgacgtcagtcctgcagagcgcactcac
aaggtgattgcactggtcaacaagatggtgagcatgatggagggggtgattcaggaagta
gaccaggttgatcagacacagaagaatatcgcaggggcgcttgccttctggatggccaat
gcgtctgagctcctcaactttgtcaaacaggaccgagatcttagtcggatcacactggat
gcccaggacgttttagcacacttggttcagatggcatttaaatatctggttcattgtctt
caatcagaactgaataattacatgccagcctttctggatgaccctgaagagaacagccta
caaagaccaaaaatagatgatgttctgcacacgctcacgggagccatgtctttgctgcgg
cgctgcagagtcaatgccgccctgaccatccagctcttctcccagctcttccacttcgtc
aacatgtggctcttcaacaggctggtgaccgaccccgagtcaggactgtgctctcactac
tggggggcaatcatccgccagcagctgggacacgtggaagcctgggcagagaagcagggc
ttggagctggccgccgactgtcacctcagccggatagtgcaggcaaccactttgcttaca
atggataaatacgcacctgatgacattccaaatataaacagtacctgctttaagttaaac
tcactgcaactgcaagccttgttacagaattaccactgtgcacccgatgagccttttatc
cccacggacctgatagaaaatgtggtggctgtggctgaaaacacggctgatgagctggcg
cgcagtgacgggagggaggtgcagctcgaagaggaccccgatctgcagctgccttttctt
ttgccagaagatggctattcttgtgatgttgtcaggaacattccaaatggtttacaagaa
tttttggaccctttgtgccagagaggattttgcaggctcgtccctcacgcacgctcacca
ggtacttggacgatatattttgaaggtgcagattatgagagccaccttctgcgcgagagc
acggagctggctcagcctctgaggaaagaacctgaaataatcactgtgactcttaaaaag
caaaatgggatgggcctcagcattgttgcagcaaagggtgctggtcaagataaactcgga
atctatgtcaagtctgttgtaaaaggaggtgctgcggatgtggatggacgcctggctgca
ggtgaccagctcctcagtgtggacggacgaagtctggtaggactctctcaagaaagggcg
gcagaactcatgacaagaacaagttctgtggtaacactggaagtagcaaagcagggagca
atttatcacggcctcgccaccctgctcaatcagccgtccccgatgatgcaaagaatttca
gaccgtcgtggctcaggtaaaccccgaccaaagagtgaaggtttcgagctctataataat
tcagctccaaacgggtcacctgagagccctcagctgccctgggcagaatacagtgaaccg
aagaaattgccaggcgacgacaggctgatgaagaaccgggctgatcaccgctctagcccc
aacgtagcaaatcagcctcctagccctggagggaagagcacgtacgcccccggaacaaca
gctaagataacgtctgtctccactgggaacctctgcactgaggaacagacccctccacct
agacctgaggcctaccccatccccactcagacgtacaccagagagtatttcaccttccca
gcttccaaatcccaggaccggatggctcctcctcagaaccagtggccaaattacgaggag
aagccacacatgcacccagacagtaatcattccagtattgcaattcagcgtgttacccgt
tcccaagaggaacttcgggaggataaagcataccagctagagaggcatcaaatcgaggca
gtcttggatcgcaagtctgatagtgatatgtggatccatcagagctcctcagtgggctcc
agcacctccagccaagagcacctggaccactcctccaagtcaggcacccccgcgtccact
ctgaccaagagcggccctgggcgctggaagacgccagccgctgtgcagcccatgcccgcg
gccgtctcccagcctgtccaaacagatccgcccccgccaccgccaccgcctcccacacac
tatgccggagactttgacggaatccccgtggacttgcctctccctccgcctcctgccggc
cagacaggacccgcgtctgctcaggcggcggccgcagagcggcggaagcgggaggagcac
cagcggtggtatgagaaggagaaggcccgtctagaagaggagcgggacaggaagcgcagg
gagcaggagcggaagctgggccagatgcgctcccagtccctgaacccggccccgttctct
cctgtgaccgtcccacacgtgaagccagaaaaaccgtccacactgcagaggccccaggag
acggtcattcgggagctgcagccccagcagcagccccgcacgattgagcgcagagactta
cagtacattacggtcagcaaagaggagctgtcgtcgggagacagtctgtccccagacccg
tggaagcgggatgccagggagaagctggagaagcagcagcagatgcacatcgtggatatg
ctgagcagggagatccacgagctccagagcaagcccgagcgcagtgcggaggagaacgac
cgcctgcggaagctcatgctggagtggcagttccagaagagactccaggagtccaaacag
aaggacgaggatgacgaggaagaggaggacgatgacgtggataccatgctgatcatgcag
cgccttgaggctgagcggagagcaaggcagactgctctgccagcaatctctgttctagat
ttgttacaggatgaggagcggaggcgccagcagcagctggaagagatgcgcaagcgggaa
gccgaagatcgcgccaggcaggaggaggagcggcgccgccaggaggaggagagaacaaag
cgagatgctgaagaaaagaggcgacaagaagaaggttattacagccgcctggaagccgag
aggcgcagacagcacgcggaggccgagcgcaggttgctggagccggaggagccgggtctg
tgcagacctccgcttccgcggggctacgagctcccgtccctgtcccctccggctgccgct
cctcctcccccgcctcagcggaccgcctcctccctccaggcgcaggccctctccccagac
tccgtgtacaccgccaggctcgttgcgtaccacgaggaggcggcggaggagcactgcggc
ctggcaggaccaaactcttacatgggatcggctgggacagctgttggtgcccatgatgct
tatcgggatccgagagagagactgtctaaaagccacgatgcagatttacctgggagtccg
ggagcccctgagaacttgacgttcagagagcgccagcgcctgttttcacaaggtcaagat
gtgtccaacaaagtaaaagcctctcgtaaattaacagaactggaaaacgaactgaacaca
aaatga
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integrated database retrieval system