Ailuropoda melanoleuca (giant panda): 100483130
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Entry
100483130 CDS
T01329
Symbol
SCN3A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100483130 (SCN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100483130 (SCN3A)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100483130 (SCN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
100483130
NCBI-ProteinID:
XP_002926965
Ensembl:
ENSAMEG00000002310
LinkDB
All DBs
Position
2:complement(134481403..134590565)
Genome browser
AA seq
2000 aa
AA seq
DB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKREQDNDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFDTNTTSYFNGTMD
SNGIFVNVTMSTFNWKDYIEDDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNNKGERDRFPKSESEDSVKRRSFLFS
MDGNRLTSDKKFYSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRHGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGP
SALTSPTGQLPPEGTTTETEVRKRRLSSYQISMEMMEDSSGRQRAMSIASILTNTMEELE
ESRQKCPPCWYRFANVFLIWDCCDAWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTGQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISSDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKN
KIRECFRKTFFRKPKVIEIHEGNKIDSCISNNTGIEISKELNYLKDGNGTTSGVGTGSSV
EKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEESKEKLNATSSSE
GSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSIEEGKGKVWWNLRKTCY
SIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWV
AYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGNMFEVSEVNN
LSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYEE
NLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSR
INLVFIILFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV
KKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPNTIHPGSSVKGD
CGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKF
DPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRV
LGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNFRCYLLRQRL
KKVSSEYNKEAIKGRIDLPIKEDMIIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKEK
FEKDKPEKESKGKEVRENQK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtacccccggggcctgaaagcttccgcctttttactagagaa
tctcttgctgctatcgaaaaacgtgctgcagaagagaaagccaaaaagcccaagagagaa
caagacaatgatgacgagaacaaaccaaagccaaacagtgacttggaagctgggaagaac
cttccatttatttatggagacattcctccagagatggtgtcagagcccttggaggacttg
gacccgtactatatcaacaagaaaacttttatagtattgaacaaagggaaggcaattttc
cgattcagtgccacctctgccttgtatattttaactccgctaaaccctgttaggaaaatt
gctattaagattttggtacattctttattcagcatgcttatcatgtgcactattttgacc
aactgcgtatttatgaccttgagtaaccctccagactggacgaagaatgtagagtacaca
ttcactggaatctacacctttgagtcacttataaaaatcttagcaagagggttttgctta
gaagattttacattccttcgtgatccatggaactggctggatttcagtgtcattgtgatg
gcatacgtgacagagtttgtggacctgggcaatgtctcagcgctgagaacattcagagtt
ctccgagcactgaaaacaatttcagtcattccaggtttaaagaccattgtaggggcccta
atccagtccgtgaagaagctttctgacgtcatgatcttgactgtgttctgtctgagcgtg
tttgcgctaattgggctgcagctgttcatgggcaacctgcggaataaatgcttgcaatgg
cccccaagcgattctgcttttgataccaacaccacatcctactttaatggcacaatggat
tcaaatgggatatttgttaatgtaacaatgagtacatttaactggaaggattatattgaa
gatgacagtcacttttatgttttggatggacaaaaggaccctctactctgtggaaatggc
tcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaaccccaac
tatggatacacaagctttgatacctttagttgggctttcttgtctctatttcgactcatg
actcaagactactgggagaacctttaccagttgacattacgtgctgctggaaaaacatac
atgatattttttgtcctggtgattttcttgggatctttctatttggtgaatttgatcctg
gctgtggtggccatggcctatgaggaacagaaccaggccaccttggaagaggcagaacag
aaagaggctgaatttcagcaaatgctggaacagcttaaaaagcaacaagaagaagctcag
gcagttgcagcagcatcagctgcttcaagagatttcagtggaataggtgggttaggagag
ctcctggaaagttcatcagaagcatcaaaattaagttctaaaagtgctaaggaatggagg
aaccgaaggaagaaaagaagacaaagggagcatcttgaaggaaacaacaaaggagaaaga
gacaggtttcccaaatctgaatctgaggacagtgtcaaaagaagaagcttccttttctcc
atggatggaaaccgactgactagtgacaagaaattctactcccctcatcagtctctgtta
agtatccgtggctccctgttttctccacgacgcaatagcaaaacaagcattttcagcttc
agaggtcgagcaaaggatgtcggttctgaaaatgactttgctgatgatgagcacagtaca
tttgaagacagcgagagccggagagactcactgtttgtgccgcacagacatggagagcga
cgcaacagtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagca
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggacca
tcagctctaacctcacctactggacaacttccgccagagggcaccaccactgaaacagaa
gtcagaaagagaaggctaagttcttaccagatttcaatggagatgatggaggattcctct
ggaaggcaaagagccatgagcatagctagcatcctgaccaacacaatggaggaacttgaa
gaatctagacagaaatgtccaccatgctggtacagatttgccaatgtgtttttgatctgg
gactgctgtgatgcatggttaaaagtaaagcatcttgtgaatttgattgttatggatcca
tttgttgatcttgccatcactatttgcattgtcttaaataccctctttatggccatggag
cactacccaatgactggtcaattcagtagtgtattgaccgtaggaaacttggtcttcact
gggatcttcacagcagaaatggttctcaagatcattgccatggatccatactattatttc
caagaaggctggaatatatttgatggaattattgtcagccttagtttgatggaacttggc
ctggcaaatgtggagggattgtctgtactgagatcattcagactgcttcgagttttcaag
ttggcaaaatcctggcccacgctgaatatgctgataaagatcattggcaattctgtgggg
gctttaggtaatctcaccttggtgttggccatcattgtcttcatttttgctgtggtcggc
atgcagctgtttggtaagagctacaaagaatgtgtctgcaagatctccagtgactgccaa
ctcccacgctggcacatgaatgacttcttccactccttcctgattgtgttccgtgtgctg
tgtggagagtggatagaaaccatgtgggactgtatggaggtcgccggccaaaccatgtgc
cttattgttttcatgttggtcatggtcattggaaaccttgtggttctgaacctctttctg
gccttattgttgagttcatttagctcagacaatcttgctgctacagatgatgataatgaa
atgaacaatctccagattgcagtaggaaggatgcaaaagggaattgattatgtgaaaaat
aagatacgggagtgtttcagaaaaactttttttagaaagccaaaagttatagagatccat
gaaggcaacaaaatagacagctgcatatccaataatacgggaatagaaataagcaaagaa
cttaattatcttaaagatgggaatggaaccaccagtggtgtaggtaccggaagcagtgtt
gaaaaatatgtaatcgatgaaaatgattatatgtcattcataaacaaccccagcctcacc
gtaacagtgccaattgctgttggagagtctgacttcgaaaacttaaatactgaagagttt
agcagtgagtcagaactagaagaaagtaaagagaaattaaatgcaaccagctcatctgaa
ggaagcacagttgatgttgctccaccccgagaaggtgaacaagctgaaattgaacctgag
gaagaccttaaaccggaagcttgctttactgaaggatgtattaaaaagtttccattctgt
caagtaagtatagaagaaggcaaaggaaaggtctggtggaatcttcggaaaacctgctat
agcattgttgaacacaactggtttgagactttcattgtcttcatgattcttctcagcagt
ggtgctttggcttttgaagatatatacatcgaacagagaaagactatcaaaaccatgcta
gaatatgctgacaaggtcttcacttacatattcattctggaaatgctcctcaaatgggta
gcttatggatttcaaacatatttcaccaatgcctggtgctggctagatttcttgattgtc
gatgtttctttggttagcttggtagccaatgctctcggctactcagaacttggtgccatt
aaatctctacggacactgagagctttaagacctctaagagctttgtcccggtttgaaggc
atgagggttgttgtgaatgctcttgttggagcaattccctctatcatgaacgtactcttg
gtgtgtctcatcttctggctgatctttagcatcatgggtgtgaatttgtttgctggcaag
ttctaccactgtgttaacacaacaacgggtaacatgtttgaagtcagtgaagtcaacaat
ttgagtgactgtcaggctcttggcaagcaagctcgatggaaaaacgtcaaagtaaatttt
gataatgttggcgctggctatcttgcattgcttcaagtggccacatttaaaggctggatg
gatattatgtatgcagctgttgattcacgagatgtaaaacttcagcctgtatatgaagaa
aatctatatatgtatttatacttcgtcatctttatcatctttgggtcattcttcactctg
aatctattcattggtgtaatcatagataacttcaaccaacagaaaaagaagtttggaggt
caagacatctttatgacagaggaacagaaaaaatactacaatgcaatgaagaaacttgga
tccaagaaacctcagaagcccatacctcggccagcaaacaaattccaaggaatggtcttt
gactttgtaaccagacaagtctttgatatcagcatcatgatccttatctgcctcaacatg
gtcaccatgatggtggaaactgatgatcagagcaaatatatgactctagttttgtcccgg
atcaaccttgtgttcattatcctgttcactggagaatttgtgctaaagctcatctctctc
agatactactacttcaccataggctggaacatttttgattttgtggtggtgattctctcc
attgtaggcatgtttctggctgagctgatagaaaaatactttgtgtctcctaccctgttc
cgagtgatacggctcgccaggattggtcgaatcttgcgtctgatcaaaggggccaaggga
atccgcacgctgctcttcgctctgatgatgtcccttccggccttgtttaacatcggcctc
ctgctcttcctggtcatgttcatctacgccatctttggaatgtccaactttgcctatgtt
aaaaaggaagctggaattgatgacatgttcaactttgagacctttggcaacagcatgatc
tgcctgttccaaattaccacctctgctggctgggatggattgctagcacctattctcaac
agtgcaccccctgactgtgatcccaacacaattcaccctggtagctcagttaagggagac
tgcgggaacccatctgtcgggattttcttttttgtcagttacatcatcatatcatttctg
gtcgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgctactgaggaa
agtgcagagcccctgagcgaggatgactttgagatgttctatgaggtctgggagaagttt
gatcccgatgccacccagtttatagagttctccaagctctcggatttcgcagctgccctg
gatcctcctcttctcatagccaaaccaaacaaagtccagctcattgccatggacctgccc
atggtcagtggggaccggatccactgcctcgacattttatttgcctttacaaagcgtgtt
ttgggtgagagtggagagatggatgcccttcgaatacagatggaagaccggttcatggcg
tcaaatccctccaaagtctcctatgagcccatcacaaccactctgaaacgcaaacaagag
gaggtgtctgctgctatcattcagcgtaatttcagatgttatcttttaagacaaaggtta
aaaaaggtatcaagtgaatataacaaagaggcaattaaaggaaggattgacttacctatc
aaagaagacatgattattgacaaattaaatggaaactccaccccagaaaaaacagatgga
agttcctctaccacatctcctccttcctatgacagtgtaacaaagccagacaaagaaaag
tttgagaaagacaaaccagaaaaagaaagcaaagggaaagaggtcagggaaaatcaaaag
taa
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