Ailuropoda melanoleuca (giant panda): 100483263
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Entry
100483263 CDS
T01329
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X2
KO
K18752
transportin-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100483263 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100483263 (TNPO1)
03009 Ribosome biogenesis [BR:
aml03009
]
100483263 (TNPO1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100483263 (TNPO1)
Ribosome biogenesis [BR:
aml03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
100483263 (TNPO1)
Pre-60S particles
100483263 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
TPR_IPO5
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
Ltn1_1st
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
TPR_TTI1_C
Dopey_N
RTP1_C1
PIK3R4-like_middle
CandA_N
DUF3689
Motif
Other DBs
NCBI-GeneID:
100483263
NCBI-ProteinID:
XP_011225907
Ensembl:
ENSAMEG00000007147
UniProt:
A0A7N5JA56
LinkDB
All DBs
Position
3:48706643..48798741
Genome browser
AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgctgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaactcaatcaatatccagattttaacaactacctgattttt
gttcttacaaaattaaaatctgaagacgaacccacaagatcattgagtggtctcattttg
aagaataacgtgaaagcacattttcagaacttcccaaatggtgtgacagactttattaag
agtgaatgtttaaacaatattggtgattcctctcctttgattagagccactgtaggtatt
ttgattacaaccatagcttccaagggagaattgcagaattggcctgacctcctaccaaaa
ctctgtagcctattggattctgaagattacaacacttgtgagggagcatttggtgccctt
cagaagatctgtgaagattctgctgagattttagatagtgatgtgttagatcgtcctctc
aacatcatgatccccaaatttttacagtttttcaagcacagtagtccaaaaataaggtct
catgccgttgcatgtgtcaatcagtttatcatcagtaggactcaagcgctgatgttgcac
attgattcttttattgagaacctctttgcattggctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgggcacttgtgatgttgcttgaagttcgaatggatcgcctgcttcct
cacatgcataacatagttgagtacatgctacagaggacgcaagatcaagatgaaaacgtg
gctttagaagcctgtgaattctggctcactttggctgagcaacccatatgcaaagatgta
ctcgtaaggcatcttcctaaattgattcctgtattagtgaatggcatgaagtactcagat
atagatattatcctacttaagggggatgttgaagaagatgagacaattcctgatagtgaa
caggatataaggccccgttttcatcggtcgaggacagtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgacgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctagatgttcttgcaaatgtgtatcgtgat
gagcttttgccacacattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatccggcatcttggttttaggagcaattgctgaaggttgtatgcaaggcatg
attccatacctgcctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacattgggtagtcagccag
ccccccgatacgtacctgaagccattaatgacagaattgctaaagcgaatcctggacagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccttagaagaggaggcttgt
acggaacttgttccttaccttgcttatatacttgataccttggtcttcgcatttagtaaa
taccagcataagaacctgctcattctttatgatgccataggaactttagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagccctgcagtctggcttccttccatactgtgaacccgtgtaccagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctgaacaatgctcaaccagatcaa
tatgaggctcctgataaagattttatgatagtggctcttgatttactcagcggcctagct
gagggacttggaggcaacattgaacaactagtagcccgaagtaacattctaacactaatg
tatcagtgcatgcaggataaaatgccggaagttcgacagagttccttcgccctgttaggt
gacctgacgaaagcttgctttcagcatgttaagccttgtatagctgatttcatgcctata
ttgggaaccaacctaaatccagagttcatttccgtctgcaataatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagggacaatgaggaaaaggattca
gcatttcgtgggatttgtaccatgatcagtgtgaatcccagtggagtaatccaagatttt
atatttttttgtgatgctgttgcatcgtggattaacccaaaagatgatctgagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggggatgaaaattggaggcgtttc
tctgaccagtttccgcttcccttaaaagagcgtcttgcagctttttacggtgtttaa
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