KEGG   Ailuropoda melanoleuca (giant panda): 100483283
Entry
100483283         CDS       T01329                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aml01009]
    100483283 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100483283 (KDM5B)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100483283 (KDM5B)
Protein phosphatases and associated proteins [BR:aml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100483283 (KDM5B)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100483283 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 PHD_2 zf-PHD-like Lipoprotein_20
Other DBs
NCBI-GeneID: 100483283
NCBI-ProteinID: XP_034523551
Ensembl: ENSAMEG00000012088
LinkDB
Position
8:complement(102343890..102395468)
AA seq 1484 aa
MAFLNSLRDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLSTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETAEARTHNLRRRMGCPATKCENEKEMKGIVKQEPIEKKEYIVESEKEKPKSRS
KKTTNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEMRVRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEALQVGGRVPVLDTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAANTFLTE
NSPYSLLEVLCPRCDIGLWGLKRKQRKFKEPLPSGKKKSTKLESLSDLERALSESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSPVQDLELRVCLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKSVQDRVGSGLWYSRWQASTGQVSETNKVSQPTGTTSFSLPEDWD
SRASYVHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTLLAKPTPAQQT
DRSSPARPSSEKNECCRGKRDGINSLERKLKRRLEREGLSSDRWDRVKKMRTPKKKKIKL
SHSKDMNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEV
DWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRCTVKDAPSRK
NT seq 4455 nt   +upstreamnt  +downstreamnt
atggcctttttaaacagcttgagggattggcagccaccatttgcatgtgatgttgataaa
cttcattttaccccacgtatccagaggctgaatgaattggaggctcaaactcgagtaaaa
ctgaatttcttggaccagattgcaaagtattgggagttgcagggaagtactctgaaaatt
ccacacgtggagaggaagatcttggacttgtttcagctcaataagttagttgcagaagaa
ggtggatttgcagttgtttgcaaggatagaaaatggaccaaaattgccaccaagatggga
tttgctcctggcaaagctgtgggctcccatatcagagggcattatgaacgcatcctcaat
ccctacaacttgttcctgtcaggagacagtttgaggtgtctgcagaagccaaacctgagc
acagacacgaaggacaaggagtacaaacctcatgatattccccagaggcagtctgtgcag
ccctcagaaacatgccccccagcccgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaaccagaagagacagcagaagccagaactcataacctgagaagacgaatg
ggttgtccagctacaaaatgtgaaaatgagaaagaaatgaaaggcatcgtcaagcaagaa
cccattgagaagaaagagtacattgtagaaagcgagaaggaaaaacccaagagccgatct
aaaaaaaccaccaatgctgtggatctgtatgtctgcctcttatgtggcagtggcaacgat
gaggaccggcttctcttgtgtgatgggtgtgacgacagttaccacaccttttgcttgatc
ccccctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaggag
tgtagtaagccacaagaagcatttggctttgaacaagcagccagggactataccctccgt
acttttggggaaatggcggatgcgttcaaatctgattatttcaacatgccagtccatatg
gttcccacagaactagttgagaaagaattttggcgactggtaagcactattgaagaggat
gtcactgtagaatatggagccgatatcgcctcaaaagaatttggcagtggcttccctgtc
cgagatgggaaaatcaaactgtcacctgaggaggaggagtatcttgatagtggctggaat
ttgaacaatatgccagtaatggagcagtctgtccttgctcacattactgctgatatatgt
ggcatgaaacttccttggttgtatgtgggaatgtgcttttcttcattctgttggcatatt
gaagaccactggagctattcaattaactacctacactggggtgagccaaaaacctggtat
ggagtcccggggtatgctgccgagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatcttctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcatgaagtgcctgtttaccgaactaatcagtgtgctggggagttcgtgatt
acatttccaagagcctaccacagtggttttaatcaaggttttaattttgctgaggctgtt
aacttctgcactgttgattggctgccattaggccgccagtgtgtggagcattatcgcttg
cttcaccgctattgtgtattttcccacgatgagatgatttgcaagatggcttccaaggct
gatgtactagatgtcgtagtggcttcaaccgttcagaaagacatggccattatgattgag
gatgagaaggctttaagagaaactgtccgtaaattgggagtaattgattcggaaagaatg
gattttgagctgttgccagatgatgagcgtcagtgtataaaatgtaaaaccacatgcttc
atgtctgccatctcctgttcttgtaaacctggcctgcttgtttgcctacatcatgtaaaa
gaattgtgttcctgtcctccttataaatataaactgaggtatagatacactctggatgat
ctctaccccatgatgaatgcactgaaacttagagcagaatcttacaatgaatgggccctg
aatgtgaatgaagctttggaggccaagattaacaaaaagaaaagccttgtcagctttaag
gctttaatagaagaatctgaaatgaagaaattcccagacaatgatcttctgcgtcacctt
cgcttagtcacacaggatgcagagaagtgtgcctctgttgcacagcagctgcttaatggc
aaaaggcaaactagataccgatctggtggaggaaaatcccaaaatcagttgacagtgaat
gagctccgacagtttgtgacacagctgtatgcacttccatgtgtcctcagtcaaacacct
ttgctaaaggatctcttgaatcgtgtagaagatttccaacagcacagccagaaattgctc
tctgaggaaatgcccagtgctgcagagctgcaagacttgctagatgtcagctttgaattt
gatgttgaacttccacagcttgctgagatgcgtgtccgtctggagcaggcccgttggcta
gaagaggtgcagcaagcttgcctagaccccagctcccttacattagatgatatgagacgt
ctcatagacctaggggtgggtctggccccatattcagcagtggagaaagcaatggcccgg
cttcaggaactgctcacagtgtcagagcactgggatgacaaagccaagagtcttctcaag
gccagacctcggcattcactgaacagccttgctacagcagttaaggagattgaggagatc
cccgcatatttgccgaatggtgcagctctgaaagactctgtgcagagagccagggactgg
cttcaggatgtggaggccctgcaggttggaggacgtgtgccagtgttagacacactcata
gaacttgttacccgaggccgatctatcccggtacatctgaattctttaccaagactggaa
ttactagtagctgaggttcaggcttggaaagaatgtgctgctaatacattcttgactgag
aattctccatattctctcttagaggtgctgtgtcctcgatgtgacattggcctttgggga
ttgaagaggaagcagagaaagttcaaggagcccttgccaagtggaaagaagaaaagcacc
aaactagagagtctgagtgacctggagagagccttaagtgaaagcaaggagactgcttca
gctatggcaacacttggggaagctcgcctaagggaaatggaagccttgcagtctctcaga
ctagccaacgaagggaagttgctgtcacctgtccaagatttggagctgagagtctgcctg
tgtcagaaggccccagctgcccccatgatccagtgtgaactctgcagggatgctttccac
actagctgtgtggcggtacccagtatttcacaaggcccacgaatctggctttgtccccat
tgtcggaggtcagagaaacctccattagagaaaattctgcccctgctggcttccctgcag
cgtatccgagtccgccttcctgagggagatgcacttcgatatatgatcgaaagaaccgtg
aactggcaacacagagcccagcagctgctttcatcagggaatctcaaatctgtgcaagat
cgagtgggctcaggactgtggtatagcagatggcaagcttcaacaggacaggtgtccgag
acgaacaaggtgtctcagcctactggcacaacatccttttccttgcctgaggactgggac
agcagagcctcctatgtacactctcccttctccactggccgaagttgtatccccctccat
ggtattagtccagaagtgaatgaactattgatggaagcccagttgctccaggtatccctt
cctgaaattcaggaactttaccagactttacttgcaaagccaacccctgctcagcagacc
gaccgaagttcaccagctagaccgagcagtgagaagaacgagtgctgccgcgggaagcga
gatggaatcaacagtcttgagagaaaactgaagagacgcctggaaagagaaggcctctcc
agtgatcggtgggatcgagttaaaaaaatgcggacccccaaaaagaagaaaatcaaactg
agccactccaaggacatgaacagtttcaagttagagagagagcgtagctatgaattagtc
cgttctgccgaaactcattccctgccctcagacacatcctattccgaacaggaggactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgaggtg
gactgggtccagtgtgatggcagctgcaatcagtggtttcaccaggtctgtgttggtgtt
tctccagagatggcagagaaggaagactacatctgtgtgcgctgtactgtgaaggacgca
ccaagccgaaaataa

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