Ailuropoda melanoleuca (giant panda): 100483347
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Entry
100483347 CDS
T01329
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04151
PI3K-Akt signaling pathway
aml04510
Focal adhesion
aml04512
ECM-receptor interaction
aml04518
Integrin signaling
aml04820
Cytoskeleton in muscle cells
aml04974
Protein digestion and absorption
aml05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100483347 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100483347 (COL6A2)
04518 Integrin signaling
100483347 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100483347 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100483347 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100483347 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100483347 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100483347 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100483347 (COL6A2)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100483347 (COL6A2)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100483347 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
100483347 (COL6A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
100483347
NCBI-ProteinID:
XP_034510111
Ensembl:
ENSAMEG00000001501
UniProt:
G1L445
LinkDB
All DBs
Position
1
Genome browser
AA seq
1017 aa
AA seq
DB search
MFRSPCPALLLWGLLGAVHAQQQEVIAPGNSERNSCPEKADCPINVYFVLDTSESVTMQS
PIDSLLYHMKQFVRQFISQLQDETYLEQVALSWRYGGLHFSDVVRVFSPPDSDRASFTKS
LESIVSIRKGTFTDCALANMTQEIRQLKSKGGVHFAVVITDGYVTGSPCGGIKLQAERAR
EEGIRIFTVAPDQVPNEQGLRDMASMPLELYRNNYATVRPDLEIDQDTINRIIKVMKHEA
YGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGV
PGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGSRGPDGYAGEAGS
PGEQGDQGVKGDAGRPGRRGPPGENGAKGSKGYQGNNGSPGSPGVKGAKGGPGPRGPKGE
PGRRGDPGAKGSPGSNGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGALGE
PGKEGSRGDPGDAGPRGESGQPGPKGDPGRPGFSYPGPRGTPGDKGEPGPPGPEGGRGDF
GAKGEPGRKGEKGEPADPGPPGEPGPRGPRGSPGPEGEPGPPGDPGLTECDVMTYVRETC
GCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGTRVGV
VQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKESRRQK
TRVFAVVITDGRHDPRDDDLNLRALCNHDVTVTAIGIGDMFHERHESENLYSIACDKPQQ
VRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPVDIVFLLDGSE
RLGEQNFHKARRFVEEVSRRLTLARRDDDPLNARVALLQFGGPGEQQVEFPLTSNLTVIH
QALEGARYLNSFSHVGAGIVHAINHVVRGARAGARRHAELAFVFLTDGVTGNDSLEEAVH
SMRKQNVVPTVVAVGGDVDTDVLSKISLGDATAVFREKDYDSLTQPGFFDGFIRWIC
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaagcccctgccccgccctcctgctctgggggctcctgggggccgtccatgcc
cagcagcaggaggtcattgcccccggcaactccgagagaaacagctgcccagagaaggct
gactgccccatcaacgtgtactttgtgctggacacctcggagagcgtcaccatgcagtcc
cccatcgacagcctgctctaccacatgaagcagttcgtgcgtcagttcatcagccagctg
caggacgagacctacctggagcaggtggccctgagctggcgctacggcggtctgcacttc
tccgacgtggtgagggtgttcagcccgccggacagcgaccgggcctccttcaccaagagc
ctggagagcatcgtgtccatccggaaaggcaccttcaccgactgcgcgctggccaacatg
acccaggagatccgccagctcaagagcaagggtggggtacactttgcggtggttatcacc
gacggctacgtcaccggcagcccgtgcgggggcatcaagctgcaggctgagcgggcccga
gaggagggcatccggatcttcaccgtggccccggaccaggtcccgaacgaacagggtctg
cgggacatggccagcatgccccttgagctctaccgtaacaattatgccaccgtgcgtccc
gacctggagatcgaccaggacaccatcaaccgcatcatcaaggtcatgaaacatgaagcc
tatggagagtgctacaaggtgagctgtctggagatccccgggccccccggccccaagggc
taccgcggacagaagggcgccaagggcaacatgggcgagccaggagagcctgggcagaag
ggacgacagggagacccaggcatcgaaggccccattggattcccaggacccaagggtgtt
cctggtttcaaaggagagaagggtgaatttggagcagacgggcggaagggggcccctggc
ctggccggcaagaacgggaccgatggacagaagggcaagctggggcgcatcgggcctcct
ggctgcaagggagaccctgggagtcggggccccgatggatacgcaggggaagccggcagc
cccggggagcagggcgaccagggcgtcaagggagatgctggccgcccaggacgcagagga
cccccaggagagaacggggccaaaggaagcaaggggtaccaaggcaacaacggatccccg
ggaagtcccggtgtgaaaggagccaagggtggacctgggccccgaggacccaaaggcgag
cctgggcgcaggggggacccaggagccaagggcagcccgggcagcaacggccccaagggt
gagaagggagaccctggccctgagggtccccggggtctggctggagaggttggcaacaaa
ggagccaagggagaccgaggcttgcccggacccagaggccctcagggggctctcggagaa
cccgggaaggagggatctcggggagaccccggtgatgctggtccccgtggagagtcagga
cagcccggtcccaagggagaccccggccggcctggattcagctacccaggaccccgagga
acacctggagacaaaggcgagcctggcccacctggccctgaggggggcagaggtgacttt
ggtgccaaaggagagcccgggaggaaaggagagaagggcgagcccgcagatcccggtccc
cctggcgagcccggcccacgggggccaagaggatccccaggacccgagggagagcccggc
ccccctggagaccccggcctcacggagtgtgacgtcatgacctacgtgagggagacgtgc
gggtgttgtgactgtgagaagcggtgtggggccctggacgtggtgttcgtcattgacagc
tctgagagcattggctacaccaacttcaccctggagaagaactttgtcatcaacgtggtc
aacaggctgggggccattgccaaggaccccaagtcagagacgggaacccgcgtgggcgtg
gtgcagtacagccacgagggcactttcgaggccatccagctggacgatgagcgcatcgac
tcgctgtccagcttcaaggaggccgtcaagaacctggagtggattgccggcggcacctgg
acgccctcggccctcaagttcgcctacaaccagctcatcaaggagagccggcgccagaag
acccgcgtgtttgcggtggtcatcacggacggccgccacgacccccgggatgatgacctc
aacctgcgggctctgtgcaaccacgacgtcacggtgacagccatcggcatcggcgacatg
ttccacgagagacacgagagcgagaacctctactccatcgcctgtgacaagccacagcag
gtgcgaaacatgaccctcttctccgatctcgtggccgagaagttcatcgatgacatggag
gacgtcctgtgcccagaccctcagatcgtgtgcccggaccttccctgccaaacagagctg
tacgtggcccagtgcacgcagcggcctgtggacatcgtcttcctgctggacggctccgag
cggctgggtgagcagaacttccacaaggcgcggcgcttcgtggaggaggtgtcccggcgg
ctgacgctggcgcgcagggacgacgacccgctcaacgcgcgcgtggccctgctgcagttc
gggggccctggcgagcagcaggtggaattcccgctcacctccaacctgacggtcatccac
caggcgctggaaggcgctcgctacctcaactccttctcgcacgtgggcgcgggcatcgtg
cacgccatcaaccacgtggtgcgcggcgcgcgggcgggggcgcggcgccacgcggagctg
gccttcgtgttcctcaccgacggcgtcacgggcaatgacagcctggaggaggccgtgcac
tccatgcgtaagcagaacgtggtgcccaccgtggtggccgtgggcggcgacgtggacaca
gacgtgctgtccaagatcagcctgggcgacgcgaccgccgtcttccgcgagaaggactat
gacagcctgacccagcccggcttcttcgacgggttcatccgctggatctgctag
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integrated database retrieval system
