Ailuropoda melanoleuca (giant panda): 100483463
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Entry
100483463 CDS
T01329
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04068
FoxO signaling pathway
aml05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100483463 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
100483463 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100483463 (RAG1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100483463 (RAG1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100483463 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
CurL-like_PKS_C
Motif
Other DBs
NCBI-GeneID:
100483463
NCBI-ProteinID:
XP_002926544
UniProt:
D2HV49
LinkDB
All DBs
Position
16:66615001..66626554
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPSTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQVEKKVSSEGKPSLE
QSPAVPDQADGQKPALSQPALKAHPKFLKKSHDDGKTRDKAIHQANLRHLCRICGNSFKT
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSMHPTEFCHNCW
SIMYRKFSSAPCEVYFPRNATMEWHPHTPSCDICHTAHQGRKRKSHQPNVQLSKKLKTVV
DRARRARRHKRRTQARISTKEAMKKISSCGNIHLSTTLLAVDFPAHFVKSISCQICEHIL
ADPVETTCKHVFCRICILRCLKVMGSYCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNRHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKAVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKITIARGSENVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVDELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNAYKNSGFTLS
SQSGVGDQLGLEDSPETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccatccaccctgggactcacttctgccccagatgaaattcagcac
ccacatattaaattttcagaatggaaatttaaactattcagggtgcgatcttttgaaaag
gcacccgaagaagctcaagtagaaaagaaagtttcctctgagggaaaaccctctctggag
caatctccagcagtcccagaccaggctgatggtcagaagccagctctgagtcaaccggca
ttaaaagctcaccctaagtttctgaagaaatcccatgatgatgggaaaacaagagacaaa
gcaatccaccaagccaaccttcgacatctctgccgtatctgtgggaattcttttaaaact
gatgggcacaataggagatatccagtccacgggcctgttgatggtaaaacccaagtcctt
ttacggaagaaggaaaagagagccacttcctggccagaccttattgccaaggtcttccgg
atcgatgtgaaagcagatgtggactccatgcaccccaccgagttctgccataactgctgg
agcatcatgtacaggaagtttagcagtgccccatgtgaggtttacttcccaaggaatgca
accatggagtggcacccccacacaccctcctgtgacatttgccacactgcccaccaggga
cgcaagaggaagagtcatcagccaaacgtgcagctcagcaaaaaactcaaaaccgtggtt
gaccgagcgagaagagcccgtcggcacaagagaagaactcaggccaggattagcaccaaa
gaagcgatgaagaagatttccagctgtggtaatatacatcttagtaccacccttcttgca
gtggacttcccagcacactttgtgaaatccatctcctgccagatttgtgaacacattctg
gctgaccctgtggagaccacctgtaagcacgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggtagctattgtccctgttgccagtatccctgcttccctactgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaatgaggaggtcagcttggaaaaatataatcgccacgtctcgagccacaag
gaatccaaagagacttttgtgcatattaacaaagggggtcggccccgccagcatctcctc
tcgttgacccggagggctcagaagcaccgccttagggagctcaagctgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaaagctgtgtgtctgaccttgttcctgctg
gcgctgagggcgaggaatgagcacagacaagcggatgagctggaggccatcatgcagggg
cggggctctgggctgcagccagcggtttgcttggccatccgtgtcaacaccttcctcagc
tgcagccagtaccacaagatgtacaggactgtgaaagccatcaccgggaggcagattttc
cagcctttgcatgcgcttcggaatgccgagaaggtcctcttgccaggctaccaccccttt
gagtggcagccccctctgaaaaatgtgtcctccagcactgacgtgggcattattgatggc
ctgtctgggctgtcctcctctgtggacgattaccccgtggacaccattgcgaagcggttc
cgctacgactcggctttggtgtctgctctgatggacatggaagaagacatcctggaaggc
atgagagcccaagaccttgatgactacctgaatggccccttcacagtcgtggtgaaggag
tcttgcgacggaatgggagatgtgagcgagaagcacggcagcgggccagcagttccagaa
aaggcagttcggttttcgttcacggtcatgaaaattaccatagcacgtggctcagaaaac
gtgaaggtgttcgaagaagtcaaacctaactctgaactgtgttgtaagcctctgtgtctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagccctctcattgct
gagagggaggccatgaagagcagccaattaatgcttgagatgggaggcatccttcggact
ttcaagttcatcttcaggggcactggctatgatgagaaactcgtccgggaagtcgaaggc
ctcgaggcttctggctcagtatacatttgtaccctttgtgatgccacccgcttggaagcc
tcacaaaatcttgtcttccactccatcaccagaagccactctgagaacctggagcgctat
gaggtctggcgttccaacccataccacgagtctgtggacgaactgcgggatcgggtgaaa
ggggtctcatcgaaacctttcatcgagacagtcccttccatagacgcactccactgtgac
attggcaatgcggccgagttctacaagattttccagctagagataggggaggtgtataag
aatcccaatgcctccaaagaggaaaggaaaagatggcaggctacgttggacaagcatctc
aggaagaagatgaaccttaagccgatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagacggttgaagcagtctgtgaattaattccctctgaggagaggcacgaa
gctctgagagagctgatggacctttacctgaagatgaagcctgtatggcgatcgtcatgt
cctgcgaaagagtgcccagaatccctctgccagtatagcttcaattcgcagcgttttgct
gagctcctctctaccaagttcaagtatagatacgagggcaaaatcaccaattattttcac
aaaaccctggcacacgtccctgaaattattgagagagatggctccattggggcgtgggcg
agtgagggaaatgagtctggcaacaaactattcaggcgcttccgaaaaatgaatgccagg
cagtccaaatgctatgagatggaggatgtcttaaaacaccactggctctatacctccaaa
tacctgcagaagttcatgaatgctcataatgcgtataaaaactctgggtttaccttaagc
tcgcagtcaggcgtaggggaccagttaggcctagaggactctccggaaactcaagattcg
atggaattctaa
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integrated database retrieval system
