Ailuropoda melanoleuca (giant panda): 100483501
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Entry
100483501 CDS
T01329
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100483501 (PKD1L2)
04091 Lectins [BR:
aml04091
]
100483501 (PKD1L2)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100483501 (PKD1L2)
Lectins [BR:
aml04091
]
C-Type lectins
Others
100483501 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
100483501
NCBI-ProteinID:
XP_002917769
Ensembl:
ENSAMEG00000029920
LinkDB
All DBs
Position
12:complement(74650509..74738943)
Genome browser
AA seq
2448 aa
AA seq
DB search
MSAVGLVLLGLALRFRATISKPEEGIFCSESQVAFRDSCYEFVPLGRTFYGAQSWCEEQG
GHLVFIHDENTQQFLQKHLSQDREWWIGLIGNSAQNGTTKGPGIWLDTSNVSYSHWRGGQ
VTPAPNTCGYIGRDASFGWAASDNCTQPFAFICEFGAGQSLACAGLNATMHCSSGEVIQI
QNAFYGRQTPHYCTQGAAGPSEEECSWTSVKDEVAGQCQGLQVCQVAADGTYFGNVCPTQ
GSYLWVQYQCQEGLQLMVSNESFIFDNVTISLTWLLSPFIGNLSCIISTGDGHTFDPYYP
PSSSSNVIHQFTAPGEFTVFAECTTTEWHVMAQKHVTIRDKMERLSVTGCSSLSKSGGSP
LCRAIFGDPLWIQVVLDGGTGVTYTALSGNTSLAEFTTPSGLLPYNLTLDRAAQQRMGPG
MHHLEIRATSNTTTSVPSRNITVHFMELLSGLQASWGSDHLELGQDLLVNVSVAHGIPEG
LTFEVVGLNANFSHQEESLEGPFGIYHVAVPLEGTFLVTVTVRNAFSNLSLEVGSITVTA
PSSLQEPSGTNAKEKNREKGDVQVYVEPGQYVDPFTTVTLGWPDSDKDLRFQWSCGRCWA
QWSYCVERQLLRTDQRELVLPPSCLPPPNSAITLRLATWRGGELENQEEQCLYVSSPLEL
RPRVSCEKNCRPVNASEDVVLRVTMGDDSSVAMFNWYLEDTSLEKAEPLPAVCRFHGFWL
SSLILLQSNNSMLRLNSSFLQTWGQAIRIRATAVTGHAYGEDTYVISSLPPPEVPICTIT
PKEGTVLTSFTIFCNTSSALGPLEYCFCLESGSCLHCGPEPALPSVYLPLGKVNNNFMLT
VVISVSSLAGDKQQAHAAVKVGLGDTHVGNVAFQAAVLENITTTLQGERDPEQLFQLARA
VLSTLDQECQGHGCGWLLNMDIRQKVREHVLGSLSAVTATLGDIQRVQKLAQVLREATHP
SEELTPVAQGEATWVLQHASEALLAVSSRARPEDQRRQAATKDLFQAVGSVLEASLREGP
EDPGEAKGSQMASVPQLLRVVEHVQAALLLGTLPGGLPATLVTPSISIYTNRIQPWSWRG
SSVHSAAAHSATFTLPAASSLGSMEDSQEPVDIRVISFLKNPFPAQSHFDVSGTVGGLCL
TSPSGHLIPMKNLSENIEILLPRLSEGHSEPTVLNLTSPEALWVNLTSDGAALGIQLHWR
PDIPLILSLGYGYHPNETSYDAKAHLPPVATADGLSTWILNPEDLHFGEGVYYLTVVPES
DLELTPGRDLTVGITTFLSHCVFWDEVRGTWDNSGCQVGPRTTHSQTHCLCNHLTFFGST
FLVMPNNIDVCQTADLFATFEDNPVVVTTVGCLCVAYLLVVIWARRKDAQDQAKVKVTVL
EDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLSDPDIPIFERGGVDV
FLLSTLFPLGELTSLRLWHDNSGDQPSWYVSRVLVHDLARDRKWHFLCNSWLSIDVGDCV
LDKVFPVATEQDRKQFSHLFFMKTSTGFQDGHIWYSIFSCSARSNFTRVQRVSCCFSLLL
CTMLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSLLMFPINLLIVQIFRNTRPR
VTKEQNTGKWDRGSPSLASSLQPLDDGLLTLEVVTKDMWRLVSSLFKALKVPSPASGWDS
ATLMDINQLLALVEEVICLQNMAGPEFWEEAKQRKDNLMLPLGSLRVKEQMRCLLPEAGP
SDPQKDNAYKQCLYLQLEHMEQELQLVGPCGFPQSQNHAQALSQLQMLKGCLGGQLGTPP
PAFSSFPMVSKRPRGLPWWCVLVGWLLVAATSSVAAFFTMLYGLHYGRASSLKWLISIAV
SFVESVFVTQPLKVLGFAAFFALVLKRVEDEEEPVASLPGHLSGPDPSALFRPRRCSRKD
IYQPPLATDIEKMKTTHLKEQKAFAFIREILAHLGFLWMLLLVAYGQRDPSTYYFNRHLE
HSFTHGFSAVLSFKEFFIWANTTLVSNLYSHYPGFITDGNSKLVGGAQIRQVRVRESSCP
LAPQLQASLDGCHAPYSLDIEDLSDYGEGWNASIPNNSSGFSQAWQYQSQSQRRGYPIWG
KLTVYRGGGYVVPLGTDRKSTSRILQYLFDNTWLDSLTRAVFVEFTVYNANVNLFCIITL
TLETSALGTFFAHVNLQSLRLYPFTDGWHPFMVAAEAIYLLFLLYYMIVQGKLMRKQRWS
YFHSKWNLLELTIILASWSALAMFVKRAILAERDIQHYRNHGEEGISFGETAAADAALGY
IIAFLVLLSTVKLWHLLRLNPKMNMITSALSHAWGDISGFIIVILIMLLAYSIASNLIFG
WKLRSYKTLFDAAETMISLQLGIFNYEEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVI
LVAFNEEQKYDQLSEEGEIADLLLMKILGFLGIKRKREEPGNSSEQPK
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgggtttggtgctcttggggcttgctctgaggtttagggccacaatctct
aagccagaggagggcatcttttgctcggaaagccaagtggccttcagagactcttgctat
gaatttgtgcctcttggtcgcaccttctatggtgcccagagctggtgcgaggagcaaggg
ggccacttggtctttattcatgacgaaaacacccagcagtttctgcagaagcacctttcc
caggacagggaatggtggattggactcataggtaactcggctcagaatggaactacaaaa
gggccggggatctggctggacacctcaaatgtgagctacagtcactggcgcggaggacag
gtcactcctgctccaaacacctgtggttacatcgggagagatgcttcctttgggtgggcg
gcctcagacaactgcacacagccatttgccttcatctgcgagtttggtgctggccagagt
ctggcctgtgctggcctcaatgccaccatgcactgcagctcaggggaggtcatccagatc
cagaatgccttctatgggcgccagaccccccattattgcacccagggtgccgcaggtccc
tcagaggaggaatgcagctggaccagcgtcaaggatgaagtggcaggccagtgccagggg
ctgcaagtatgccaggtggcagcagatgggacctactttggaaacgtgtgccccacccag
ggcagctacctgtgggtgcagtaccaatgccaagaaggcctgcagctgatggtgtccaat
gagagtttcatctttgacaatgtcaccatctctttgacatggctcctctctcccttcatt
ggaaatctgtcatgtataattagtacaggagatggccacactttcgatccctactacccc
cccagttcatccagcaacgtgatccaccagttcacagcccctggagaattcactgtgttt
gctgagtgcacaaccacggagtggcatgtgatggctcagaagcatgtgacaatccgagac
aagatggagaggctcagtgtgactgggtgttccagcctgtccaagtcaggaggcagccct
ctctgccgcgctatcttcggggacccattgtggattcaggtggtactcgatggaggaact
ggggtgacttacactgcactgtcgggtaacacaagcctggctgagttcaccacgccgagt
ggcctgctaccctacaatctgaccctggaccgagcagcccagcaaaggatgggccccggg
atgcaccacctggagatcagagccaccagcaacaccaccacctctgtaccctctagaaac
atcacagtccacttcatggagcttctgtcggggctacaggcctcctggggttctgaccac
ttggagcttggacaggacctactagtcaacgtctcggtggctcatggcatcccggagggg
ctgacctttgaagtggtaggacttaatgcaaacttctcccatcaagaagaaagcctcgag
gggccatttgggatttaccatgtggcagttcctcttgaaggcacctttctggtcactgtg
acggtgaggaatgccttctcaaacttaagtttggaagtcggaagcatcactgtcacagct
ccttccagtctgcaagaaccatctggaacaaatgccaaggaaaagaatagagagaaaggg
gatgtgcaggtgtatgtggaacctggtcagtacgtggatcctttcacgactgtgactctg
ggctggccagacagtgacaaggatttacgcttccagtggtcatgtggacgttgctgggcc
cagtggagctactgtgttgagaggcagctgctccgcacagaccaaagggagctggtgctt
cctccgtcctgcctgccaccgcccaactctgccatcaccctgcgcctggccacctggaga
ggtggggagctggagaaccaggaggagcagtgcctctatgtgtcctcccccctggagctc
aggcctcgagtcagctgtgagaagaactgcagaccagtgaatgccagtgaagacgtcgtg
ctcagagtcaccatgggggatgactcctcagtggccatgttcaactggtatttagaagac
acctctctggagaaggctgagcctctcccagctgtctgcagattccatggattttggctg
agttctttaatcctccttcagagcaacaactccatgctgcggttgaacagctccttcctg
cagacctggggccaggccatccggatcagagccacagcagtgactgggcatgcctatggg
gaggacacctatgtgatcagctctctgcctccccccgaggtgcccatctgcaccatcacc
ccgaaggagggtaccgttctgacaagcttcaccatcttctgcaacacatcctcggccctg
ggccccctggagtactgcttctgtctggagtcaggttcctgtctacactgtggccctgag
cctgccctcccgtcagtttatctgccacttgggaaagtaaacaataacttcatgctgaca
gtggtcatttctgtctccagtcttgcaggggacaaacagcaggcccatgcagcagtaaag
gtgggacttggagacacccatgttggcaacgtggcattccaagccgcagtgttggagaac
atcaccaccactctgcaaggcgagcgggacccggagcagctcttccagctggccagagct
gtgttgtccacgctagaccaggagtgccaggggcatggctgcgggtggctactgaacatg
gacatcagacagaaggtcagagagcatgtgctggggtcactgtctgcggtcactgccacc
ctgggggacatacagagggtacaaaagttggcccaggtgctgagagaggcaacccacccc
agtgaggagctcacacctgtggcccagggggaggccacctgggttctgcagcatgccagt
gaagccctgttggcagtgagttccagggcccgtcctgaagaccagaggcgccaagcagcc
accaaggacctgtttcaggctgtgggcagtgtgctggaagcttccctgagggagggacca
gaagaccctggagaggccaagggcagccagatggcctctgtgccccagctgcttagagtt
gtggagcatgtgcaagctgctctccttctggggacactgcctggaggcctcccagccact
ctggtcaccccctccatctccatatacacaaacagaatacagccctggagttggcgaggc
tcttctgtgcactctgcggctgcccactctgcaacctttaccctgcctgctgcctcctcc
cttggctccatggaggacagccaggagcctgtggacatcagggtgataagtttcctaaag
aaccccttcccagcccagagtcacttcgacgtcagtggaactgttggtggcctctgtttg
accagccctagtggacatctcatacccatgaagaatctgtcagagaatatcgagatcctg
ctgccccggctttcggaaggacacagtgagccaactgtgctaaacctgaccagtcctgaa
gctttgtgggtgaacctgacttcagacggggcagctttggggatccagctgcactggaga
cctgatatcccactcatactcagcctgggctatggctaccaccccaatgagaccagctat
gacgccaaagcccaccttccgccagtggctactgcagatggtctgtccacatggatcctg
aacccagaggacctgcattttggggaaggtgtctactatctgaccgtggtccccgagtct
gacctggagctgacccctggcagggacctcacagttggcattaccaccttcctatcccac
tgtgtgttctgggatgaggtccgggggacttgggacaactctgggtgccaggtggggcca
cggaccacccactcccagacacactgcctctgcaaccacctcaccttctttggaagcacg
ttcctggtgatgcccaacaacattgacgtctgccagactgccgacctctttgccaccttc
gaggacaaccccgtggttgtgaccaccgtgggctgcctctgtgtggcctacctgctggtg
gtgatctgggcgaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtgctg
gaggacaatgatccctttgcccagtaccactacctggtaacagtctacactggacaccgg
agaggggcagctacttcctccaaggtgactgtcactctatatggcctggatggagagagt
gaaccccaccacctgtcagaccctgacatcccaatttttgagcgaggaggagtggatgtc
ttcttactctctaccctgttccccctgggggaactgacaagtctgcggctgtggcatgac
aactcaggggaccagccatcctggtatgtgagccgggtgctggtgcatgacctggctagg
gaccggaagtggcatttcctctgcaactcgtggctgtccatcgatgtcggagactgtgtc
cttgacaaagtatttccggtggccacagaacaggacaggaaacaattcagccacctgttt
ttcatgaagacctccacaggcttccaggatggacacatctggtactccatcttcagctgc
tcagctcggagcaacttcacccgtgtccagagggtgtcctgctgcttctcccttctcctc
tgcaccatgctgaccagcatcatgttctggggtgttcccaaggacccagctgagcaaaag
atggacttgggtaaaattgaattcacttggcaggaagtgatgattggactggagagctct
ctcctcatgttccccatcaatctcctgattgttcagatctttcgaaacacccgtcctcga
gtcactaaggagcagaacactgggaaatgggacaggggctcccctagcctggcctcctca
ctgcagcccctagacgatggccttctgacacttgaagtggtgactaaggatatgtggaga
ctcgtcagctccctgtttaaagctctgaaggtgccatcacctgcctctggctgggactca
gcaaccctaatggacatcaatcaactgctggccttggtggaagaagtcatctgtctgcag
aacatggcagggccggagttctgggaggaagccaaacagagaaaggacaatttaatgctc
cctcttgggtctctacgagtgaaagaacaaatgagatgcctgttgccagaggcgggccca
agtgaccctcagaaggacaatgcctacaagcagtgtctctaccttcagctggagcacatg
gagcaagagcttcagctggtggggccctgtggcttcccccagagccagaatcacgcccag
gccctcagccagctacagatgctgaagggctgcctggggggacagctgggcaccccaccc
ccagcattcagcagcttcccgatggtcagcaagcgtcctcgaggcctgccctggtggtgc
gtcctggtgggctggctcctggtggcggccaccagcagtgtggcggccttcttcaccatg
ctctacggcctgcactatggacgggccagctccctcaagtggctcatctccattgccgtc
tccttcgtggagagcgtgtttgtcacccagcccctgaaggtgctgggctttgctgccttc
tttgcactggtcttgaagagagtggaggatgaggaggagcctgtggcctcccttccggga
catctgtccggcccagacccctctgccttgttccgaccacgaagatgcagcagaaaagat
atttaccagccacctttggccactgacatcgagaagatgaaaaccacccatctcaaggaa
cagaaggcatttgccttcatcagagaaatcttggcacacctgggcttcctgtggatgctg
ctgctggttgcctacgggcagagggaccctagcacctactacttcaacagacaccttgag
cacagcttcacccacggcttttcagctgtgttaagcttcaaggagttcttcatatgggcc
aacaccactcttgtgagcaacctgtacagtcattacccaggctttatcactgatgggaac
tctaagctggttggcggtgcccagattcgtcaagtgagggtccgggaaagctcgtgccct
cttgccccacagctgcaggcttctcttgatggatgtcatgcaccatattccctggatatt
gaagatctgtcagactatggggaaggctggaatgcctccatacccaataacagcagtggt
ttttcccaggcttggcagtatcagagccagagccaacgccgagggtatcccatctggggc
aaactcactgtgtaccggggaggaggttacgtggtccccttggggactgatcgtaaaagc
acatcaagaattctccagtacctctttgacaacacctggctggacagcctgaccagagcc
gtttttgtggagttcacggtctacaatgccaacgtcaacctgttctgcatcatcactctg
accctggagactagcgccctgggaaccttctttgcacatgtgaaccttcagagcctgcgc
ctgtaccccttcactgacggctggcaccccttcatggtagcagcagaggccatctacctc
ctgttcctcctctactacatgattgtgcagggcaagctcatgaggaaacagaggtggtcc
tatttccatagcaagtggaatcttctggagctaaccatcatcctggccagctggagtgcc
ttggcgatgtttgtgaaaagggccatccttgcagaacgtgacatccagcactaccggaac
catggggaggaggggatcagtttcggtgagacagcagcggctgatgctgcccttggctac
atcattgccttcttggtactgctgtccacagtgaagctttggcatctgctcaggttgaac
cccaaaatgaacatgatcacttcagccctgagccatgcttggggggacatttcagggttt
atcatcgtcatccttatcatgcttctggcttactccattgcgtcaaacttaatatttggt
tggaaactccgttcctacaaaaccctctttgatgcagcagaaacaatgatcagccttcag
ctaggaatctttaactacgaggaggtcctggactacagcccagtgcttggctccttcttg
attgggtcttgcatcattttcatgacatttgtggtgctgaatctatttatctctgtcatc
ctggtggccttcaatgaggagcaaaaatatgatcagctgtcggaggaaggagagattgcc
gatttgttgctgatgaaaatactcggtttcctgggtatcaaacgtaaaagagaggagcct
ggaaacagcagcgagcagcccaaatag
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integrated database retrieval system
