Ailuropoda melanoleuca (giant panda): 100483587
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Entry
100483587 CDS
T01329
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100483587 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100483587 (PRPF8)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100483587 (PRPF8)
Complex C
U5 SnRNP specific factors
100483587 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
100483587
NCBI-ProteinID:
XP_002918084
Ensembl:
ENSAMEG00000007940
UniProt:
D2H8C5
LinkDB
All DBs
Position
13:1923635..1954801
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccagattacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcagaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacatgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggtgccctcaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
catatcactggagccatttcttttgttaatgagattccctgggtcattgaacctgtttac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgat
aacatcctagatgttgaaccactggaggctattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggctccacttaccagcgctggcaattcacactgcccatgatgtctacactctaccgc
ctagccaatcagctcctgacagacttggtagatgacaactacttctatctgtttgatctg
aaggccttctttacctccaaggcgctcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctccaggatgaagactggaatgaattcaatgatattaac
aaaatcatcatccggcagcctatccgcactgaatacaagattgcttttccttatctatac
aacaaccttccacaccatgtccacctcacctggtaccatactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacagacactccgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcctttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgccctgctctgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaaactgctgaagtactatgtgctgaatgccctgaag
caccgaccccctaaagcccaaaagaagaggtacctgttccgctccttcaaagctaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggctgcaggtttgccgccagggc
tataacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcatctggattac
aacttcaatcttaaacctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttt
gggaatgccttccatctgtgtagggaagttttgcgtctaactaagctggtggtggatagt
catgtgcagtatcgattgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgctcatgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaatacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcactcctttgctggagcggtggctgggcaacctcctggcccgacagttt
gaaggccgacactccaagggggtggcaaagactgttacaaagcagcgagtggagtcgcat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaacaaggcccggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtacctgggctgccaacaccgatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactacaatcgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctttatctgaaggcggaacaggagcgacagcacaactacctgaaggatgggccatac
atcacagcagaggaagcggtggcagtgtataccaccactgtgcattggttggagagccgg
aggttctcacccatcccatttcccccactctcctacaagcatgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgattgagcaagcctatgacaacccccatgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgccagtatatgatgtggagcctctggagaagatcactgatgcc
tacttggaccagtacctttggtatgaagctgacaagcgccgccttttcccgccgtggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaggacgtgtgggagacgagtgagggtgagtgcaatgttatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgctgcgactcatc
gtggaccacaacatagctgactacatgacagccaagaacaacgtcgtcatcaactataag
gacatgaaccatacaaattcttatgggatcattagaggcctgcagtttgcttcattcatc
gtgcagtactatggcttggtgatggatttgctggtgttgggactgcaccgggccagtgag
atggctgggccccctcagatgcccaatgactttcttagtttccaggacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacatcgatcgcatccacattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgacccc
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacagttcagtgggagaacagtttcgtatctgtgtacagtaag
gacaaccctaacttgctgttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggagttcactcacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctctaccactttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacatactttcgggaggctgtggtgaac
acccaggagcttctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgcccagtcggttcccacctgttgtgttctatacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacagccatgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacattggcttatgataagggctggcgtgttcgaact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcattctggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtaggttcaccctctggtggtcccca
accatcaaccgagccaacgtgtatgtaggctttcaggtgcagctggacctaacgggtatc
ttcatgcatggcaagattcccacactgaagatctctcttatccagatattccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaattcatcctcgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctagcagactccaaggatgtgatggatagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctatgcc
cgggccaagttcctggactacaccacagacaacatgagtatctacccttcgcccactggt
gtgcttattgccattgacctggcctataatctgcacagtgcctatggaaactggttccct
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgctttg
tatgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggtgagctcttctccaaccagattatatggtttgtg
gatgacacaaatgtctacagagtgactatccacaagacctttgaagggaacttgaccacc
aaacccatcaacggggccatcttcatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaagtggctgccctcatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccactggaggtgcacttgctggactttccc
aatattgtgatcaaaggatcagagctccaactacctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccacggaaccccagatggttctttttaatctctat
gatgactggctcaagactatctcatcctacacggccttctcccgcctcatcctgattctg
cgtgccctgcatgtgaataatgaccgggcgaaggtgatcctaaagccagacaagacgact
attacagaaccgcaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaagatctgatcttggctgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcttgggtatggagatctcagcaccatca
cagcagcggcagcagatagcggagattgaaaaacagaccaaggagcagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggtgatgagatcattacttctaccaccagc
aactatgagacccagactttctcctctaagactgaatggagggttagggccatctctgct
gccaaccttcacctaaggaccaatcatatctatgtttcatctgatgacatcaaggagacc
ggttatacctatatccttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcaggatacctatatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccaaaccgtgcacctgcct
ggccagcttccccagcatgagtacctcaaggaaatggaacccttaggatggatccacact
cagcccaacgaatccccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccgtcttgggatggtgagaagaccattatcatcacctgcagcttcacacca
ggttcttgcacactgacagcctataagctgacccccagtggctatgaatggggtcgccag
aacacagacaagggcaacaatcccaagggctatctgccctcacattatgaaagggtccag
atgctgctgtcagaccgcttccttggcttttttatggttcctgcccagtcctcatggaac
tataactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctccta
caagagggcgaggtctattctgcggaccgagaggacctctatgcgtag
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integrated database retrieval system
