Ailuropoda melanoleuca (giant panda): 100483709
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Entry
100483709 CDS
T01329
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100483709 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100483709 (PAN3)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100483709 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
100483709 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
Torus
Motif
Other DBs
NCBI-GeneID:
100483709
NCBI-ProteinID:
XP_034520904
Ensembl:
ENSAMEG00000002349
UniProt:
A0A7N5KRM4
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All DBs
Position
7:68956283..69085310
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AA seq
949 aa
AA seq
DB search
MNSGGGLPPPSAAASPSSSSLAAAVAVVAPPGVGGIPGGAAAGVKLKYCRYYAKDKTCFY
GEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPVAAFPPGAVPGGGAGPPPGPKKPDLG
GPGAGAAAGGGGSSGVLDGPRLAIPGIDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKY
PLMQRMTNSSSSPSLLNDSAKPYAGHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLE
ERLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGST
SRLSNVSQSNMSAFSQVFSHPSMGSPAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRR
SHTPNPANYMVPSSASTPVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLTGMRSFK
NYHRTACRTEGQIIEVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITM
AQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLR
RIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSR
HFNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVM
DPTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNS
LAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQ
MRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQ
VTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIA
AANALNVLLALGAQPCNSEENVETQKVRKDFQALATDVTVFNFNNYTYL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctccccttcctcctcctcg
ctggcggcggcagtggcggtggtggccccgccgggggttgggggtatccccggcggggcg
gccgcgggagtgaagctgaagtactgccgctactacgctaaggataagacttgcttctac
ggggaggagtgtcagttcctgcatgaggacccggccgccggagctgccccgggcctcggc
ctccatagcaacagcgtccccctggctctggcgggcgcgcctgtggccgcctttccgccc
ggagcggtcccgggcgggggagccgggccgcccccggggcccaagaagccggacctaggg
ggtcccggtgccggagccgcagccggaggaggaggcagcagcggagtactcgatggaccg
cggctggcaattcctggaatagatggaggtgctttaactgataccagtctcacagattcc
tatttcagcaccagctttattggagttaatggatttggaagcccagtggaaacaaaatat
cccttgatgcagagaatgactaatagtagcagctccccaagtcttctaaatgacagtgcc
aagccatatgcaggccatgatcctctaacttcacctgcttcatccttgtttaatgatttt
ggtgccctcaacatctctcagaggagaaagccaaggaagtatcgcctggggatgctggag
gagaggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgcctt
gctgacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaa
aacaatttacagacaccaaatcctactgcaagcgagtttattcctaaaggaggatcaacc
tccaggctgagtaacgtgtcccagtcaaatatgtctgccttctctcaagtgttctctcac
ccatccatgggaagtcctgctgctgctggattagcaccaggaatgtccttgtctgctgga
tcttcccctcttcattctcccaagatcactccacatacttctcctgctcccagaagaaga
agtcacactccaaatccagcaaattacatggtgccttctagtgcctctacacctgttaat
aatcctgtttctcagactccatcttctggtcaggtgatccaaaaggaaactgtcggtggg
acgacttacttctatacagacacaaccccagcacctttgactggaatgagatctttcaaa
aattatcacagaacagcttgccgaacagaaggtcaaataattgaggtatttccaaactat
catatttatcctccaactgcacctcatgttgcttatatgcaaccaaaagcgaatgcacct
tccttcttcatggctgatgaactccgacaggagctgattaacaggcatttaataacaatg
gctcaaatcgatcaagcagatatgccagcagtccctacagaagttgacagctaccatagc
ctgtttcctctagaaccactgccaccacccaatcggatacagaaatcaagtaattttgga
tacattacatcttgctacaaagctgtaaatagcaaagatgatctgccatattgccttcgg
aggatacatggttttcgtcttgttaacacgaagtgcatggtgttggttgatatgtggaaa
aaaattcagcactcaaatattgtaaccttgcgtgaagtatttaccactaaagcatttgca
gagccttctcttgtgtttgcatatgatttccatgctggaggagagactatgatgagcaga
cactttaatgaccccaatgctgatgcctatttcacaaagagaaaatggggtcaacacgat
ggaccattgcccagacagcatgcaggattattgccagaatctcttatttgggcatatatt
gtccaactgagttctgcattgcgtaccattcacacagcaggtttggcatgtcgagttatg
gacccaacaaagattctgataactggcaaaacaaggttgcgagtaaattgtgttggagtt
tttgatgttttaacatttgataacagtcagaataataatccattggcattaatggctcaa
taccagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaactct
ttggcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaactac
tcctctgacctgaagaatctgattttgtatttgttgactgaccaaaacaggatgcgaagt
gtaaatgacatcatgcccatgattggtgctcgattttatactcaattggatgctgctcaa
atgagaaatgatgtcatagaggaagaccttgcaaaggaggttcaaaatggaagactgttt
aggcttctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatcctacc
tggtcggagactggagaccgttatcttttgaaactctttagggatcatcttttccatcag
gtgacagaagcgggtgctccttggattgacctcagtcatatcatttcttgtcttaacaag
ttagatgctggtgtgcccgaaaaaataagcctcatttccagagacgagaagagtgtactt
gtggtgacttatagtgacttaaagcgctgcttcgaaaacacttttcaagaactgattgca
gctgcaaatgcactgaatgttttactagcactgggtgctcaaccatgcaactctgaagaa
aatgtggaaactcaaaaggtcaggaaagacttccaagcacttgcaactgatgttacggtc
ttcaattttaataattacacatatttgtag
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