KEGG   Ailuropoda melanoleuca (giant panda): 100483830
Entry
100483830         CDS       T01329                                 
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X5
  KO
K17908  autophagy-related protein 18
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04136  Autophagy - other
aml04140  Autophagy - animal
aml05010  Alzheimer disease
aml05014  Amyotrophic lateral sclerosis
aml05016  Huntington disease
aml05017  Spinocerebellar ataxia
aml05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100483830 (WIPI2)
   04136 Autophagy - other
    100483830 (WIPI2)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100483830 (WIPI2)
   05014 Amyotrophic lateral sclerosis
    100483830 (WIPI2)
   05016 Huntington disease
    100483830 (WIPI2)
   05017 Spinocerebellar ataxia
    100483830 (WIPI2)
   05022 Pathways of neurodegeneration - multiple diseases
    100483830 (WIPI2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100483830 (WIPI2)
   03029 Mitochondrial biogenesis [BR:aml03029]
    100483830 (WIPI2)
Membrane trafficking [BR:aml04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100483830 (WIPI2)
Mitochondrial biogenesis [BR:aml03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100483830 (WIPI2)
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 DUF7165 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st BCAS3_WD40 Beta-prop_WDR19_1st Beta-prop_RSE1_2nd RMC1_N VID27 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 100483830
NCBI-ProteinID: XP_011219609
Ensembl: ENSAMEG00000006521
LinkDB
Position
10:3481825..3522267
AA seq 310 aa
MKVLHTIRETPPNPAGLCALSIHNDNGYLAYPGSATIGEVQVFDTMNLRAANMIPAHDSP
LAALAFDSSGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDSMFLS
ASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVR
LPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGSMETTNE
ILDSASHDCPLVTQTYSAAVATGTHVPSSPTRLAYADELGAVGGACLEEEAGALRLEEDS
EHPPMILRTD
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaagtcctgcacacgatccgggagacccccccgaaccctgcaggcttgtgtgcactg
tccatacacaacgacaatggctacttggcgtacccaggcagtgccaccattggagaggtg
caggtcttcgacaccatgaacttgagagctgcgaacatgatcccggctcacgacagtcct
ttggcggcgctggcgtttgactccagtggcaccaagctcgccactgcctcggagaagggg
accgtgattagggtattctccattccagagggacaaaaactctttgagttccggagagga
gttaagaggtgtgtgagcatctgctccttggccttcagcatggacagcatgttcctctcc
gcgtccagcaacactgagactgtgcacatcttcaaactcgagactgtgaaagaaaaacct
caggaggagcccaccacctggaccgggtacttcgggaaggtgcttatggcttccaccagc
tacttgccctcccaagtaacagaaatgttcaaccagggcagagcctttgccacagtccgc
ctgcctttctgtggccacaagaacatctgctccctggccacaattcagaagattcctcgg
ctgctggtgggagcttctgacgggtacttgtacatgtacaacctggacccccaggagggg
ggcgagtgcaccctgatgaagcagcacaagctggatggcagcatggagacgaccaatgaa
atcttagactcagcctctcacgactgccccttagtgacccagacctacagtgcagctgtc
gccacaggtactcacgtgccttcgtctccgaccagacttgcctatgcagacgagctggga
gcagtgggcggcgcgtgtctggaagaggaggccggcgctctgcggctggaggaggacagt
gagcatcctcctatgattcttcggacggactga

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