Ailuropoda melanoleuca (giant panda): 100483992
Help
Entry
100483992 CDS
T01329
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100483992 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100483992 (PRPF38A)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100483992 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
100483992 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100483992
NCBI-ProteinID:
XP_002915777
Ensembl:
ENSAMEG00000009319
UniProt:
G1LRX0
LinkDB
All DBs
Position
2:27471296..27485089
Genome browser
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtgaaagatgcgcacagcatccacggcaccaatcctcagtatctg
gtggagaagatcattcggacgcgaatctatgagtctaagtactggaaagaggagtgcttt
ggactgacggctgaacttgtagtcgataaagccatggagttaaggtttgtgggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcagatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgtccgc
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtactta
gagcctctctacaacgactatcgaaaaatcaagagccagaatcgaaatggggagtttgaa
ctgatgcatgtagatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attcttccccggctacagaaacgctatgtgctagaggaagctgagcagctagagcctcgg
gttagcgcgctagaagaggacatggatgacgtggagtccagtgaagaggaggaagaggag
gatgagaagttggagagagtcccatcacctgatcaccgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacattgcgctatagaaggagtaggagccggtctcccaga
aggcggagtcggtctcctaaaaggaggagcccctcccctcgccgagaaaggcatcggagc
aaaagcccaagacgtcaccgcagcagatctcgagacagacggcacagatcccgctccaag
tccccaggtcatcaccgtagtcacagacacagaagccactcaaaatctcctgaaagatct
aagaaaagccacaagaagagccggagagggaatgagtaa
DBGET
integrated database retrieval system
