Ailuropoda melanoleuca (giant panda): 100484078
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Entry
100484078 CDS
T01329
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100484078 (TIA1)
03041 Spliceosome [BR:
aml03041
]
100484078 (TIA1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100484078 (TIA1)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100484078 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
100484078
NCBI-ProteinID:
XP_034515199
Ensembl:
ENSAMEG00000016025
LinkDB
All DBs
Position
4:complement(93015469..93038214)
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AA seq
397 aa
AA seq
DB search
MVSCFSLCFRYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHA
AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITT
EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT
NWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQ
IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ
IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFKHSLLHLGWDQITEC
NHLQDRMAACCLISLQGIEWQGMKPSEKGLHNLKPVA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggtaagttgtttttctttgtgtttcagatatgtcggcaacctttccagagatgtgaca
gaagctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgatt
atggatacagctggaaatgatccgtattgttttgtggagttttatgagcatcgtcatgca
gctgcagcactagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaat
tgggcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcaca
cagcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaact
gaagatataaaagctgcttttgcaccatttggaagaatatcagatgccagagtggtaaaa
gacatggcaacaggaaagtctaaaggatatggctttgtctcctttttcaacaaatgggat
gccgaaaacgccattcagcagatgggtggccagtggcttggtggaagacaaatcagaact
aactgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaacag
ctatcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtatactgtgga
ggtgtcacttctgggctgacagaacaactaatgcgtcagactttttcaccatttggacaa
ataatggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccat
gaaagtgcagcacatgcaatcgtttctgttaatggaactaccattgaaggtcatgtcgtg
aaatgctactggggcaaagaaactcttgacatgataaatcctgtgcagcagcagaatcaa
attggatatccacaagcttatggccagtggggccagtggtatggaaatgcacaacaaatt
ggccagtatatgcctaatggttggcaagtacctgcatatggaatgtatggccaggcgtgg
aatcagcagggatttaaacacagtcttctgcaccttggatgggaccaaattacggagtgc
aaccacctccaggacagaatggcagcatgttgcctaatcagcctgcagggtatcgagtgg
cagggtatgaaacccagtgaaaaaggactccataatctaaagccagtggcttga
DBGET
integrated database retrieval system