KEGG   Ailuropoda melanoleuca (giant panda): 100484078
Entry
100484078         CDS       T01329                                 
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
  KO
K13201  nucleolysin TIA-1/TIAR
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100484078 (TIA1)
   03041 Spliceosome [BR:aml03041]
    100484078 (TIA1)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     100484078 (TIA1)
Spliceosome [BR:aml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    100484078 (TIA1)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_Nup35 RRM_3 Calcipressin XOO_2897-deam
Other DBs
NCBI-GeneID: 100484078
NCBI-ProteinID: XP_034515199
Ensembl: ENSAMEG00000016025
LinkDB
Position
4:complement(93015469..93038214)
AA seq 397 aa
MVSCFSLCFRYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHA
AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITT
EDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRT
NWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQ
IMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQ
IGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFKHSLLHLGWDQITEC
NHLQDRMAACCLISLQGIEWQGMKPSEKGLHNLKPVA
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggtaagttgtttttctttgtgtttcagatatgtcggcaacctttccagagatgtgaca
gaagctctaattctccagctctttagccagattggaccttgtaaaaactgcaaaatgatt
atggatacagctggaaatgatccgtattgttttgtggagttttatgagcatcgtcatgca
gctgcagcactagctgctatgaatgggcggaagataatgggtaaggaagtcaaagtgaat
tgggcaacaacccccagcagtcaaaagaaagatacaagcagtagtaccgttgtcagcaca
cagcgttcacaagatcatttccatgtctttgttggtgatctcagtccagaaattacaact
gaagatataaaagctgcttttgcaccatttggaagaatatcagatgccagagtggtaaaa
gacatggcaacaggaaagtctaaaggatatggctttgtctcctttttcaacaaatgggat
gccgaaaacgccattcagcagatgggtggccagtggcttggtggaagacaaatcagaact
aactgggcaacccgaaagcctccagctccaaagagtacatatgagtcaaacaccaaacag
ctatcatatgatgaggttgtaaatcagtctagtccaagcaactgtactgtatactgtgga
ggtgtcacttctgggctgacagaacaactaatgcgtcagactttttcaccatttggacaa
ataatggaaattcgagtctttccagataaaggatattcatttgttcggttcaattcccat
gaaagtgcagcacatgcaatcgtttctgttaatggaactaccattgaaggtcatgtcgtg
aaatgctactggggcaaagaaactcttgacatgataaatcctgtgcagcagcagaatcaa
attggatatccacaagcttatggccagtggggccagtggtatggaaatgcacaacaaatt
ggccagtatatgcctaatggttggcaagtacctgcatatggaatgtatggccaggcgtgg
aatcagcagggatttaaacacagtcttctgcaccttggatgggaccaaattacggagtgc
aaccacctccaggacagaatggcagcatgttgcctaatcagcctgcagggtatcgagtgg
cagggtatgaaacccagtgaaaaaggactccataatctaaagccagtggcttga

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