Ailuropoda melanoleuca (giant panda): 100484141
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Entry
100484141 CDS
T01329
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04080
Neuroactive ligand-receptor interaction
aml04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100484141 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
100484141 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100484141 (TRPV1)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100484141 (TRPV1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
100484141
NCBI-ProteinID:
XP_002928364
Ensembl:
ENSAMEG00000009133
UniProt:
G1LRI2
D2HZN8
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All DBs
Position
13:279453..338189
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AA seq
841 aa
AA seq
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MKKWGSSDSGESEDPPQEDSCPDPLDGDPNSRPAPAKPHFFPTAKSRSRLFGKCDSEEAS
PMDCFYEEGQLASCPAITVSPVVIIQKHEDGPTCARQPSQDSVTARSEKSLKLYDRRKIF
EAVAQNDCEELQSLLLFLQRSKKHLMDSEFKDPETGKTCLLKAMLNLHDGQNATIPLLLE
IARQTDSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKK
TKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT
ADNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLALAASSGKIGVLAYILQREIQ
EPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPL
NRLLQDKWDRFVKRIFYFNFLVYCLYMIIFTTAAYYRPVDGLPPYKLKHTVGDYFRVTGE
ILSVSGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFVQSLFMLGTVVLYFCHHKEYV
ASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTL
IEDGKNNSVPAESTLHRWRGPGCRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKA
VFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR
KAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSL
RSGRVSGRNWKNFALVPLLRDTSTRDRHPAQPEEVHLRHFAGSLKPEDAEVFRDPVALGE
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatgggggagctcagattcaggggagtctgaggacccaccccaagaggactcc
tgcccagaccccctggatggagaccctaattccaggccagctccagccaagccccacttc
ttccccacggctaagagccgcagccggctttttggaaagtgtgactcagaggaggcttct
cctatggattgcttttatgaagaaggtcagttagcctcctgcccagccatcacagtcagc
cctgttgtcatcatccagaagcatgaggatggccccacctgtgccaggcagccgtcccag
gactctgtcactgccaggtctgagaagagcctgaagctctatgaccgcaggaagatcttc
gaagctgttgctcagaatgactgtgaggagctgcagagcctgctgctgttcctgcagagg
agcaagaagcatctcatggacagcgagttcaaagacccagagacagggaagacctgtctg
ctgaaagccatgctcaacctgcacgatgggcagaacgccaccatccccctgctcctggag
atcgctcggcagacagacagcctgaaggagtttgtcaacgccagctacactgacagctac
tacaagggccagacggccctgcacattgccattgagaggaggaacatggcactagtgacc
ctcctggtggagaatggggcagacgtccaggctgcagccaatggagacttctttaagaaa
accaaagggcggcctggcttctactttggtgagctgcccctctccttggctgcatgcacc
aaccagctgggcattgtgaagttcctgctgcagaattcttggcagccagcagacatcagc
gccagggactcagtgggcaacacagtgctgcacgcgctggtagaggtggccgacaacaca
gcggacaacaccaaatttgtgacaagcatgtacaatgaaattctgatcctaggggccaag
ctccaccctacactgaagctggaggagctcaccaacaagaagggactgacaccactggct
ctggctgccagtagtgggaaaattggggtcttggcctatattctccagagggagatccag
gagcctgagtgcaggcatctgtccaggaagttcactgaatgggcgtatgggcccgtgcac
tcctcgctctatgacttgtcctgcatcgacacttgtgagaagaactcggtgctagaggtg
atcgcctacagcagcagtgagacccctaaccgccacgacatgcttctggtggaaccgctg
aaccgactcctgcaggacaagtgggacagatttgtcaagcgcatcttctatttcaacttc
ctcgtctactgcttgtatatgatcatcttcaccacagcagcctactacaggcctgtggat
ggcttgcctccctataagctgaaacacaccgtcggggactatttccgagtcactggtgag
attctttctgtatcagggggagtctactttttcttccgagggattcagtatttcctgcag
aggcggccatcactgaagaccttgtttgtcgacagctacagtgagatgcttttttttgtg
cagtcactgttcatgctggggaccgtggtgctgtacttctgccaccacaaggagtacgtg
gcctccatggtgttctccctggccatgggctggaccaacatgctctactacacccgaggc
ttccagcagatgggcatctatgctgttatgattgagaagatgatcctgagagacctgtgc
cgtttcatgtttgtctaccttgtttttttgttcgggttttccacagcggtggtgacactg
attgaggatgggaagaataactctgtgccagctgagtccacattgcacaggtggcgaggg
cctggctgccggccaccggatagctcctacaacagcctgtattccacgtgtctggagctc
ttcaagttcaccattggtatgggcgacctggagttcaccgagaactatgacttcaaggct
gtcttcatcatcttgttgctggcttacgtgattctcacctatatccttctgcttaacatg
ctcattgccctcatgggtgagactgtcaacaagattgcgcaggagagcaagaacatctgg
aagctccagagagctatcaccatcctggacacggagaagagcttccttaagtgtatgagg
aaggccttccgctcaggcaagctgttgcaagtggggtacacacctgatggcaaggatgac
tacaggtggtgtttcagggtggatgaggtcaactggaccacctggaacaccaatgtaggt
atcatcaatgaagacccgggcaactgcgagggcatcaagcgcaccctgagcttctccctg
cggtcaggcagagtttcaggaagaaactggaagaactttgccctggttccccttttaaga
gacacaagtacaagagacaggcaccctgcccagccggaggaagttcatctgaggcacttt
gcagggtccctcaagccagaagatgctgaggtcttcagggatcctgttgctttaggggag
aagtga
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