Ailuropoda melanoleuca (giant panda): 100484143
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Entry
100484143 CDS
T01329
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X4
KO
K06558
macrophage scavenger receptor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100484143 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100484143 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aml04090
]
100484143 (MSR1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100484143 (MSR1)
CD molecules [BR:
aml04090
]
Proteins
100484143 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
DUF5665
Motif
Other DBs
NCBI-GeneID:
100484143
NCBI-ProteinID:
XP_002928655
Ensembl:
ENSAMEG00000004682
UniProt:
D2I0F6
LinkDB
All DBs
Position
18:19717904..19793909
Genome browser
AA seq
454 aa
AA seq
DB search
MEQWNSFLDQQDDTDNCSESVKFDARSMTALLPLYPKNGPTLPEKLKSFKAALIVLYLLV
FVVLIPVIGVMAAQLLKREMMNCTVGSINANEISQSLTGKGNDSEDEMRFQEAVMEQMSN
MEKRIQYISDTEANLIDSEHFQNFSLVTDQRFNDVLLQLSTLVSSVQGHGNVIDEISKSL
LSLNTTLLDLQLRIKTLNGRVQDNTFKQQEDMSRLEERVYNASAEIMSMKEKQVNLEQEI
KGEVKVLNNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDRGPAGESGPRGIPGVVG
PPGLKGDRGAIGFSGPRGFPGPPGKTGRTGNPGPKGQKGDKGSGSILTPFKTVRLVGGKV
PHEGRVEIFHNGQWGTVCDDHWELRGGQVICRSLGYHGVQTVHKGAYFGQGTGPIWLNEV
FCFGRESSIEDCTIRQWGVRGCSHAEDAGVTCTL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtggaatagctttcttgatcaacaggatgacactgataactgctcggaatct
gtgaagttcgatgcccgctccatgacagccttgcttcctctgtatcctaaaaatggccct
acgcttccagagaaactgaagtccttcaaagctgcactgattgtcctttatcttcttgtg
tttgtagttctcatacccgtcatcggagtaatggcagcacagctcctgaagagggaaatg
atgaattgcacagttggttcaattaatgcaaacgaaatatctcaaagtctcacaggaaaa
ggaaatgacagtgaagatgagatgagatttcaagaagctgttatggaacaaatgagcaac
atggagaagagaatccaatatatttcagatacagaagccaacctcatagattcagagcat
ttccaaaattttagtctggtgactgatcaaagatttaatgatgttcttctccagctgagt
accttggtttcctcagttcagggacacggaaatgtgatagatgaaatctccaagtcgtta
ctaagtctgaataccacattgcttgatttgcagctcagaatcaagacactgaatggcaga
gtccaagacaatacatttaaacagcaagaggacatgagtagattagaggagcgtgtgtac
aatgcatcagcagaaattatgtctatgaaagaaaaacaagtgaatttggaacaggaaata
aaaggagaagtgaaagtactgaataacatcactaatgatctcagactgaaagattgggaa
cactctcagacattgaaaaatatcactttaattcaaggtcctcctggaccccccggtgaa
aaaggagatagaggtcctgctggagaaagtggtccgcgaggcattccaggtgtagtaggt
cctccaggtcttaaaggtgatcggggagcaattggcttttctggacctcgaggatttcca
gggccgccggggaagactgggaggacaggaaatcctggaccaaaaggccagaagggggac
aaagggagtggaagcatactaactccgtttaagacagtacgactggttggtggtaaagtt
cctcatgagggcagagtggagattttccacaatggccagtggggcacagtctgtgatgac
cactgggaactacgaggcggacaggtcatctgtaggagtttgggataccatggtgttcaa
actgtacataaaggagcttactttggacaaggtactggtccaatttggttgaatgaagta
ttttgttttgggagagaatcatctattgaagactgtacaattagacagtggggtgtgaga
ggctgttcacacgctgaagatgctggagtcacttgcactttataa
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integrated database retrieval system
