Ailuropoda melanoleuca (giant panda): 100484218
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Entry
100484218 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100484218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100484218
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100484218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQCJ-SCHIP1
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
100484218
NCBI-ProteinID:
XP_034510558
Ensembl:
ENSAMEG00000002426
LinkDB
All DBs
Position
2:134682481..134766965
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAGSRELSGAGGV
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRTKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPVNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETELRKRRSSSYHVSMDLLEDPTARQRAMSLASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRIXRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFAKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKDDILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgtaaggatgaggatgatgaaaatggcccaaagccaaatagtgacttggaggcagggaaa
tctcttccatttatttacggagacattcctccagagatggtgtcagagcccttggaagac
ctggacccatactatatcaataagaaaacgtttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctc
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgc
ttagaagatttcacatttctgcgggatccatggaattggttggatttcacagtcattact
tttgcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtcttgagagctttgaaaactatttctgtaattccaggcctgaagaccattgtgggggcc
ctgatccagtcggtgaagaagctctctgatgtaatgattctgactgtgttctgtctgagc
gtgtttgcactaataggactacagctgtttatgggcaacctgcggaataaatgtttgcaa
tggcccccagataattcttcctttgaaataaacatcacttccttctttaataactcattg
gatggaaacggtaccactttcaataggacagtgagcatgtttaactgggatgaatatatt
gaggataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcggatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaatccc
aactatggctatacaagctttgacacctttagttgggccttcttgtccttatttcgtctc
atgactcaagacttctgggaaaacctttaccaactgacactacgtgctgctgggaaaaca
tatatgatcttttttgtgctggtcattttcttgggctcgttctaccttataaacttgatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaactcttgaggaagctgaa
cagaaagaagctgaatttcaacagatgcttgaacagttgaaaaagcaacaagaagaagct
caggcagcggctgcagcggcatctgctgggtcaagagagctcagcggtgctggcggggta
ggggttttctcagagagttcctcagtagcgtcgaagttgagctccaagagtgaaaaagag
ctgaaaaacagaaggaagaaaaagaagcagaaagagcagtctggagaagaagagaaggaa
gatggggtccgcaaatccgaatccgaagacagcataagaagaaaaggtttccgtttttcc
ttagaaggaagcaggttgacatatgaaaagaggttctcttctccacatcagtctttattg
agcatccggggctcccttttctctccaagacgcaacagtagggcgagccttttcagtttc
agaggtcgaacaaaggatattggctctgagaatgactttgctgatgatgagcacagcacc
tttgaagacaatgacagccggagagactctctgtttgtgccacacagacatggagagcgg
cgtcacagcaatgtcagccaggccagccgcgcctccagggtactccccattctgccggtg
aatggaaagatgcacagtgcagtggattgcaatggagtggtctcgctggttgggggccct
tctgccctcacgtctccagctggacagctccttccagagggcacgactactgaaacagaa
ctaagaaagagacggtccagttcttatcatgtttccatggatttactggaagatcctaca
gcaaggcaaagagcaatgagtctagccagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtacaaatttgctaacatgtgtttgatttgg
gactgctgtaaaccatggttaaaggtgaaacatctcgtcaacctggttgtgatggaccca
tttgttgatctggccatcaccatctgcattgtcttaaatacactctttatggccatggag
cactatcctatgacagagcaattcagcagtgtgctgtcagtcgggaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagataatagccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaatcgtgagcctcagtttaatggaacttggt
ttggcaaatgtggaaggattgtcagtcctccgatcatttcggctgctccgagttttcaaa
ttggcaaaatcctggcccaccctgaatatgctgataaagatcattggcaactcagtgggg
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaaaagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctcccacgctggcacatgcatgacttcttccactccttcctgattgtattccgagtgctg
tgtggagagtggatagaaaccatgtgggactgtatggaggtcgccggccaaaccatgtgc
cttactgtcttcatgatggtcatggtgattggaaacctggtggttctgaacctcttcttg
gccttgctcttgagttcgttcagttctgacaacctggctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcaaaaaggaatcgattacgttaagaga
aaactacgcgaatttattcagaaagcctttgttagaaagcagaaagccttagatgaaatt
aaaccccttgaagatctaaataacaaaaaagacagctgtatttccaaccataccactata
gaaataggcaaggatctcaattatctcaaagatggaaacggaactaccagtggcataggc
agcagtgtggaaaaatatgttgtggatgaaagtgattacatgtcattcataaacaacccc
agcctcactgtgaccgtaccaattgctgtcggagaatctgactttgaaaatttaaatact
gaagaatttagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatcggaaggcagcacagttgatataggagctcccgccgagggagagcagcccgaggtg
gagcccgaagaatcccttgagcctgaagcctgtttcacggaagactgtgtgcggaagttc
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcacaactggtttgaaaccttcattgtcttcatgatttta
ctcagcagtggggcgctggcctttgaagatatatatattgagcagcgaaaaaccattaag
accatgttagaatacgccgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggtcgcgtatggttttcagatgtatttcaccaatgcctggtgctggctggatttc
ctgattgttgacgtctcattggttagcttgactgcaaatgccttgggttactcagaactt
ggtgccatcaaatccctcagaacattacgagctctgaggccactgagagccttatcccgg
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggctcatattcagtatcatgggagtaaatctcttt
gctggcaagttttatcattgtattaactacaccactggagaaatgtttgatgtaagtgtg
gtcaacaactacagcgaatgtaaagcgctcatagagagcaatcaaactgccaggtggaaa
aatgtgaaagtaaactttgataatgtaggacttggatatctttctctgcttcaagtagcc
acatttaagggatggatggatatcatgtatgcagctgttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtacctttattttgtcatctttattattttt
ggttcattctttaccctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagagcagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaggagatg
acaaacattctgtactggattaatctggtgtttattgttctgttcactggagagtgtgtg
ctgaaactaatctctcttcgctattactatttcaccatcggatggaatatttttgatttt
gtggtggtcattctctctatcgtaggcatgtttctggctgagctgatagaaaaatacttt
gtgtctcctaccctgttccgagtgatccggctcgccaggattggtcgaatcnngcgtctg
atcaaaggggccaaggggatccgcacgctgctcttcgctctgatgatgtcccttccggcc
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatcttcggaatg
tccaattttgcctatgttaagagggaagttggaattgatgacatgttcaactttgagacc
tttggcaacagcatgatctgcctgttccaaattaccacctctgctggctgggacggactg
ctagcacctattcttaatagtggacctccagactgtgaccctgaaaaagatcaccctgga
agctcagttaagggagactgcgggaacccatctgtcgggattttcttttttgtcagttac
atcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctggagaacttc
agtgttgctactgaggaaagtgcagagcccctgagcgaggatgactttgagatgttctat
gaggtctgggagaagtttgatcccgatgccacccagtttatagagtttgccaagctctcg
gatttcgcagctgccctggatcctcctcttctcatagccaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggggaccggatccattgtcttgacatcttattt
gcttttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaggagcgattcatggcatcgaatccctccaaagtctcctacgagcccatcacaaccact
ctgaaacgcaaacaagaagaggtgtctgctatcgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaggtttcgtgtatctataagaaagacaaaggcaaagaa
ggtgatggaacacctatcaaagatgatatcctcattgacaaactaaatgagaattcaact
ccagagaaaaccgatgtgacaccttccaccacttctccaccttcctatgatagtgtgacc
aaaccggaaaaggaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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