Ailuropoda melanoleuca (giant panda): 100484375
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Entry
100484375 CDS
T01329
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100484375 (CASC3)
03015 mRNA surveillance pathway
100484375 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100484375 (CASC3)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100484375 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100484375
NCBI-ProteinID:
XP_002924977
Ensembl:
ENSAMEG00000007764
UniProt:
A0A7N5KPL0
LinkDB
All DBs
Position
13:24518143..24539655
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AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRTGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGGGTLPPRTFINRNA
AGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHESSYRSRRLEQTPVRD
PSPEADAQVLGSPEKEEAASEVPAAAPDAAPPAPDRPVEKKSYSRARRTRIKAGDAVKVA
EDVPPPPEGLNPAPQVPETTPPPPAKTGSWEAPVDSTTSGLEQDVAQLNITEQNWSPGQP
SFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHIS
IMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYP
PPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgcc
ggaggcggtggcagcggctctttgccttcccaacgcggaggccgaactggggcccttcat
ttgcggcgggtggagagcgggggggctaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaggaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagtacagaacctgtggagaac
aaagtgggtaaaaagggtcctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttctttgagcatgatcttcgagggcaaacgcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaagatgagggtcgctgggagcat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgacgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattgttgagcggccaaacaag
tcccatcgccaccagggtgggggcaccctaccaccaaggacatttatcaacaggaatgct
gcagggactggccgaatgtctgctcccaggaattactctcgatctgggggcttcaaggaa
ggtcgtgctggttttaggcctgtggaggctggtgggcagcacggtggccggtctggtgag
actgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgagggac
ccatctccagaagctgatgctcaagtgctgggcagtcccgagaaggaagaggcggcctca
gaggtaccagctgctgctcccgatgctgcaccgccggcccctgacaggcctgtcgagaag
aaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggttgcg
gaggacgtgccccctccacccgaagggttgaacccggcacctcaagtcccagaaacgacc
cctcctccacctgctaagactggaagctgggaggctccagtggattctactacaagtgga
ctcgagcaagatgtggcacaactaaatataaccgaacagaattggagtccagggcagcct
tcattcctgcagccacgtgagcttcggggtatgcctaaccacatacacatgggagcagga
cctccacctcagtttaaccggatggaagaaatgggtgtccagggtggacgagccaaacgc
tattcatctcagcggcaaagacccgtgccagagccccctgctcctcctgtgcacatcagt
atcatggagggacattactatgatccattgcagttccagggaccaatctatacccatggt
gacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcaccttccc
cacccaggtttacatccccaccagacaccggcccctctgcccaatccgggtctctatccc
ccaccagtgtccatgtctccgggacagccgccaccgcagcagctgcttgctcctacttac
ttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggca
ctgcctcccccaccacctcctcatctatatcctaatacacaggccccatcacaggtatat
ggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccccccc
cggaggactccccagccagtcaccatcaaacccccaccacctgaggttgtaagcaggggt
tccagttaa
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