Ailuropoda melanoleuca (giant panda): 100484381
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Entry
100484381 CDS
T01329
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X4
KO
K11138
telomere-associated protein RIF1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100484381 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100484381 (RIF1)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
100484381 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
NICE-1
Motif
Other DBs
NCBI-GeneID:
100484381
NCBI-ProteinID:
XP_002926242
Ensembl:
ENSAMEG00000008461
UniProt:
G1LPF7
LinkDB
All DBs
Position
2:122623058..122680676
Genome browser
AA seq
2475 aa
AA seq
DB search
MTAPGESPLAPLLETLEDPSAPHGEQTDAYLTLTSRMTGEDGKEVIMEIEKKLPQLFRVL
KIHISSQNSDLSSAALQALGFCLYNPKITSGLSETDIQELLLKLNDSVKSPDKNVRTRAL
WVISKQTFPAEAIGKVVSTIIDSLEIVFNRGEMHSAVVDYEALNVIIRLIEQVPVQMGEE
SVRWAKLIIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGSSSRVAASPGLSPMTPIHKGASPYGAPVTPRMNLSSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEHALISSSSFFSKHANTLITA
VHDSFVAVGKDASDAVVNAIWKELISLMKSVIESGNKKERPGSEVLTLLLKSLESIVKSE
VFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNSNLLEYGVED
ERFFLNLETLVGCVLSGPTSPLAFSDSVFNVINQNAKLLENKEHLWRMWSIIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALILPINHIFSVQKFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDSSFSNLLFLDRIIHIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKKEPLGKLASLFKLIVSVISSFHTLSFKEVHSDTLLTVGNSITSILSN
VLGRISLPSMIRKIFATLTRPLALFYENLKLDEVPKVYSCMSNKLEKLLGETIACLHFSY
TGTYDSELLEQISPLLCIIFLHKNKQIRKQSAQFWNATFAKVTTLTYPEELKPVLRQAKQ
KFLLLLPGLENVEIMEESSGPYSDATENSQLNVKISGMERKSSGKRDSFLAQTKDAKENK
KPPVKLKLESSSTKTKSEMPLEEEKSTDFVFIPPEGKEGKERILTEHQKEVLKTKRYDIP
VMYNNLDVSQDTLFSQYTQEESMEIPTLAEKSKEDSKVIYKEEQMESDTVTPQDVMENCG
MDEHLEKASLPNNECGSNEETSPEILSRNNDARKKTLISSEKTTECASSAENTSGLHSSV
SNAIISGIPPQPTSRRQTFITLEKFDGSENRPFSPSPLNNMSSTVTVKNNQEVMGKTDIP
PKTKKREMAFTKSDSEKIAHGIKRSSRRLSKAEQTGNKRSKLLMRSDQEKNTQESVDGTV
VLENNPPGLLNQTECVLDNQAHLSESTMEYEDTMLKPTIENVVLLENNTVEEKTLGINLE
SKENTPPAVIPADQMVDENSPVQITSNQKTLRRSSRRRSEIAEPTTDSQEKENNHQKKER
RKEEEKTLQKSPLHVKDDVLPKQKLISEETVQENLIEKGNNLHEKTFGENSTTAEIDESK
RKLDLENIKSEGDGAQGIVDKSSEKPVSGRTRYQTRRASQGLLSSIENSESDSSEAKEEG
SKKKRSGKWKNKSSDSVDIEDQEEKVIKQECINVENQTLDCKANSEVERRLKSQICEQKD
ESNKTLEDSTVSSDLLQVSDDVSTTFEGKSKTNKCAEYSFSNPSMPESNLRTRNASKRLQ
KRDSIENNSMGESSKIGTSDISLLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQPQEK
SFTGLKNTENYDVKVSETKKTDMQTPVSVSETSKANLCSEVKLLDEHNGVNFHLGLKEEN
DTFNDSLIISESELKENTIQNPLPSEVVNFEEETCDTDSEEATPLESQEPSNKKCITVSP
CLDDSKDNSLECSTLETKEEKPETVLEKELSIENIANVETDACKGEAKFNPEEIEAIELG
VENDKSEASFSEQKSTETGISEEEINSERSDESEAEAAEKLKSEEAVTEEFNSGIGHSDN
TTEMSAQVEIPEQTTVGELDEGSDESGPGSSEEMNAEVENCEETVIGEVSAEADQVSETV
DQDSTTEISAKPVQAETKTAAMEIGSFILNTLEMSTEEGKVDSDKTETNIELNKSEETTS
DDNGMVGGSDEILQEVRPTSEKVEEISQSLTSETAISGLITEDNNASPQKLRELDPLLVS
ANGSPSSMQTRCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLAD
DIDRRCSIVRSHSSNNSPTVKSVKTSPTAQSKHNATSTKGFLSPGSRSPKFKSSKKCLIA
EMAKESMPCPTESVYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLT
ASEIKTLPIRSPKVSNVKKALRVYHEQQVKSRGLEEIPVFDISEKAVNGIQTKSLPSDEE
RLASDLIDPVALETPLPKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSIIK
NLQSRWRSPTHENSI
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgggtgagagccccctggcgccgctgttggagactttggaagacccttcc
gccccccatggagagcaaaccgacgcttacctgactctgaccagtcgaatgactggagaa
gatggaaaagaagtcattatggaaattgagaaaaaacttccccagctattcagagtttta
aaaattcacatttccagtcagaattcagacctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacctcaggattatcagagacagatattcaagaactg
cttttaaaattgaatgatagtgttaaaagcccagacaaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgtttcctgctgaagccattggcaaagtagtatccactata
atcgattcattagaaatagtatttaatagaggagaaatgcattctgctgttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagtcccagttcaaatgggagaagag
tcagttaggtgggcaaaattgatcatacctttagtggttcattcagctcaaaaggtacat
ttgcggggagcaactgctctagagatgggaatgccattgttgcttcagaaacaacaagaa
atagcatctatcacagagcagcttatgactactaaattactttcagagctccaaaagcta
tttatgagtaagaatgagacttatgtgttaaaattgtggcctttgtttgtcaaacttctt
gggaagaccttgcatcgaagcgggagtttcattaattctttattacagctggaagaacta
ggatttcgaagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttgaatccagaaatactatgcagtgcaaaaagactgaagttgtta
atgcagcctttgagttctatccatgtgagaacagaaactctagcactaactaagctagaa
gtctggtggtatctactcatgagacttggacctcatcttcctgctaattttgaacaggtg
tgtgtgcctctgattcaaagtacaataagcatcgattctaatgcttcacctcaaggcagt
tcatctcgtgtagctgcttctccaggtttaagtcctatgactcctatacacaaaggtgct
tccccatatggagctcccgtaactccccggatgaacttaagttcaaattttggtggaatg
gctacaatcccctctattcaacttttgggacttgaaatgctgcttcattttttgttgggt
ccagaagtcttgagttttgccaagcaaaacaaactcgtactgagcttagagccccttgaa
catgcgttaatcagcagctcttcttttttttccaaacatgcaaatacacttatcactgct
gttcatgacagctttgttgcggttggaaaagatgcttctgatgcagttgtcaatgctatt
tggaaggagctaattagcttgatgaagtcagttattgaatcaggtaacaaaaaagagaga
ccaggttctgaagttttgaccctgttactaaaatctttagaaagcatagtgaagtcagaa
gtatttcctgtgtcaaaaacactggtcctcatggaaattacaattaaaggactgccccag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcct
gctttgttcttaattcagttaattttcaacagtaatctcttggaatatggtgtagaagat
gagaggttttttctcaatctggaaacacttgttggctgtgtcctttctggtccaacttca
ccactagctttcagtgactctgttttcaatgtgattaaccaaaatgcaaagctgttggaa
aacaaggagcatctctggagaatgtggagtattatagtcaccccattaactgaattgatt
aatcagaccaatgaagtgaatcaaggtgatgccttagaacataattttagtgccatttat
ggtgcattgattttaccaataaaccatattttttcagtacagaaatttccagtggccacc
atgaagactttacttagaacttggtcagaactatatagagcatttgcccgttgtgctgct
ttggtggcaactgcagaagagaatttgtgctgtgaggaactttcttccaagataatgtcc
agtttagaagattcaagcttttcaaatttgttgttcttggataggatcattcatataatt
actgtaatggttgattgcatcgacttctcaccatacaatattaagtatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaaagaacctctagggaaattg
gcttctttatttaagcttattgtgagtgtgatctcttctttccacacactgagcttcaag
gaagtacattctgatactctcctcactgtcggcaactcaatcaccagtattctttctaat
gtacttggacgtatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaacttaaagcttgatgaagttcctaaagtgtatagttgt
atgagcaacaagttagaaaagctactaggagagacaattgcttgtctacacttcagctac
actggaacttacgacagtgaacttcttgaacagatctctccattattatgcataatattt
ttgcacaagaataaacagattcgaaaacaaagcgctcagttctggaatgccacatttgct
aaagtgacgacgttgacttaccctgaagagttaaaaccagtactaagacaagccaaacag
aaatttctgttgcttttacctggtttggaaaatgttgagattatggaggaatccagtgga
ccatattcagatgcaaccgaaaattcacagttaaatgtgaagataagtggcatggaaaga
aaatcaagtggaaaaagagattcttttttggcacaaacaaaggatgcaaaagaaaataag
aaaccaccagtcaaattgaaattagagtcgtcttctacaaaaacaaagagtgaaatgcct
ttggaagaggaaaagtctactgactttgtgtttatacctccagaaggaaaagaaggaaag
gaaagaattctaactgaacatcagaaagaagtactcaaaacaaaaagatacgatattcct
gtcatgtataataatctggatgtttcacaagacactttattttctcagtatacccaggaa
gagtccatggaaattcctactttagctgaaaaatcaaaggaagattccaaggtgatatat
aaggaggaacagatggagagtgacactgttactcctcaagatgtcatggaaaactgtggc
atggatgagcatcttgaaaaggcttcccttccaaataatgagtgtggttctaatgaggaa
accagtccagaaatactgagcagaaataatgatgccagaaagaaaactttaatttcatca
gagaaaacaactgaatgtgcatctagtgcagaaaatacttctggtctccacagctcagtt
tctaacgccatcatttctggaattcccccacagcctacaagtcggaggcaaacctttatt
actttggagaagtttgatggttcagaaaatagaccttttagtccatcccccttaaataat
atgtcttcaactgttacagtgaaaaataaccaggaagtcatgggtaaaacagatattcca
ccaaaaacaaagaaaagagaaatggctttcacaaaatctgattctgaaaaaatagcacat
ggaattaagagatcaagccgaaggttgagtaaagccgaacaaacagggaacaaaaggtct
aagctcttaatgagatctgatcaggagaaaaatactcaggaatctgttgatggcacagta
gtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgttagataatcag
gctcatctctctgaatctacaatggagtatgaggatacaatgcttaaaccaacaatagaa
aatgtggtattattagaaaacaatactgtggaagagaaaacactaggaatcaatttggaa
tccaaagaaaatacacccccagctgtaataccagcagatcaaatggtagatgagaatagt
cctgttcagataacttcaaatcagaaaacgcttagacggtcctcaaggcgacgctcagaa
atagcagagcctaccactgatagccaagagaaagaaaataatcatcaaaaaaaagaaaga
cgtaaggaagaagaaaagacccttcagaaaagtccgttgcatgtaaaagatgatgtgtta
cctaagcaaaaactgatttctgaagagacggtacaggaaaatttaattgagaaagggaat
aatttacacgagaagacttttggggaaaacagcactactgctgaaattgatgaaagtaaa
agaaagctagaccttgaaaatattaaatctgagggagacggtgcccagggtattgtcgat
aagtcctctgaaaaaccagtaagcggacgtacacggtatcaaacaagaagggcatctcag
ggtttactttccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaaggc
tctaaaaagaagagatctggaaaatggaaaaacaaaagcagtgatagtgttgatattgaa
gatcaagaggagaaagtgataaaacaggaatgtataaatgttgaaaaccagacacttgac
tgcaaagcaaattctgaagtagagagaaggctgaaatctcagatttgtgaacaaaaagat
gagagtaataaaactcttgaagattctacagtatcttcagatttattgcaggtttctgat
gatgtatcaactacttttgagggaaaaagtaaaaccaataaatgtgcagaatattccttt
tcgaacccttctatgccagaatcaaatctaaggactagaaatgccagcaagagattacaa
aaacgagattctatagaaaataacagcatgggagaatcttcaaaaatagggacatcagac
atttctttgctttctgaaaaaacctttcaaacacttgaatgccaacataagagaagtagg
agggtaaggagatctaaaggttgtgattgctgtggagaaaaatcacagcctcaggaaaag
tcattcactgggttaaagaatacagaaaattatgatgtaaaagtcagtgaaacaaaaaag
acagatatgcaaacacctgtaagtgtatcagaaacttctaaagctaatctgtgctctgag
gtaaaacttttagatgaacataatggtgtgaattttcatttgggactcaaggaggagaat
gatacttttaatgattcattaattatatctgaaagtgagttgaaagaaaatactattcaa
aaccctcttccttctgaagtagtaaattttgaagaagaaacttgtgatacggattctgaa
gaagcaacacctcttgaaagccaagagccatccaataaaaaatgtataactgttagccca
tgtttagatgattccaaagataattcactggaatgttctactttggagaccaaagaagaa
aagccagagactgttttggaaaaggaactaagtatagagaacattgccaatgttgaaaca
gatgcatgtaaaggtgaagcaaaattcaatccagaagaaatagaagctattgaattgggt
gtagaaaatgataaatctgaagctagcttttctgaacaaaagagtaccgaaactggtatt
agtgaagaagagataaatagtgaaagaagtgatgaatctgaagcagaggcagctgaaaaa
ctgaagtctgaagaagcagtaactgaagaatttaattctggtattggtcattctgataat
accacagaaatgagtgctcaggtagagatacctgaacaaacaacagttggggaattagat
gaaggaagtgacgaatctggtccaggctcatctgaagaaatgaatgctgaagtggaaaat
tgtgaagagacagtgattggtgaggtgagtgctgaagctgaccaagtcagtgaaacggtg
gaccaggactcgactaccgaaatctctgctaagcctgtacaggctgaaacaaagacagca
gctatggaaattggcagttttattctcaacacacttgagatgagcactgaagaaggaaaa
gttgactctgataaaactgaaacaaatattgaacttaataagtctgaagaaacaacatca
gatgacaatggaatggtggggggaagtgatgaaattttacaggaagttcgccctacttca
gagaaagtggaggaaatatcacagtctctgacatctgaaacagccatctctggactaata
acagaagacaataatgcatctcctcaaaaattaagggaacttgatcctttacttgtatca
gcaaatggcagtcctagtagcatgcagacacgctgtgtctggtcacctttggcttctcca
tcgaccagcattttaaagagaggactaaaaagacctcaggaagatgagatatcatcacct
gttcacaaggttcgccgtgtctcctttgcagatccaatataccaagcagggttggcagat
gacattgataggcgatgctctattgttaggtcccattcttcaaataattctcccacagta
aaaagtgttaaaacttcacctactgcacaatctaagcataatgccacttcaaccaaagga
tttctgtccccaggatcacgtagccctaagtttaagagctcaaagaagtgtttaattgca
gaaatggctaaagaatctatgccatgtccaacagaaagtgtttacccagctttggtcaac
tgcgtggctccagttgatatcattttacctcagattacatcaaacatgtgggcaagagga
ctgggacagctcattagagctaagaatataaaaacgattggtgatttgagtactcttact
gcatctgaaataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaaaaggct
cttagagtctatcatgagcagcaggtaaagtctcgtggactagaggagattccagttttt
gatatttctgaaaaagcagtaaatggaatacaaactaaatcccttccttctgatgaagaa
agacttgcctcagatttaattgaccctgttgctttggaaactccattacctaaaaatctt
gtggcacagattagtgcacttgctcttcagctagattcagaagatctccataattattca
ggaagccagctgtttgaaatgcatgagaaacttggtagcatggcgaactctataataaaa
aatttgcagtcacgttggaggtcaccaacccatgaaaattccatttag
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integrated database retrieval system
