Ailuropoda melanoleuca (giant panda): 100484487
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Entry
100484487 CDS
T01329
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aml03400
]
100484487 (SMC5)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
100484487 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_13
AAA_21
AAA_29
AAA_25
FtsK_SpoIIIE
Med9
Motif
Other DBs
NCBI-GeneID:
100484487
NCBI-ProteinID:
XP_002914785
Ensembl:
ENSAMEG00000007051
UniProt:
G1LKK8
LinkDB
All DBs
Position
17:25457077..25554397
Genome browser
AA seq
1106 aa
AA seq
DB search
MATPSRKTSAPSTLASKRALPRDPSSEVPSKRKSSAPPAAPPPLPLQSSRPFVEGSIVRI
VMENFLTYDVCEVSPGPHLNMIIGANGTGKSSIVCAICLGLAGKPAFMGRADKVGFFVKR
GCSKGMVEIELFRTSGNLVITREIDVAKNQSSWFINKKSTTQKVVEEQVAALNIQVGNLC
QFLPQDKVGEFAKLSKIELLEATEKSIGPPEMHRYHCELKNFREKEKQLETSCKEKTEYL
EKMIQRNERYKQDVERFYERKRHLDLIEMLEAKRPWVEYENVRQEYEEVKLARDRAKEEV
RKLKEGQIPITRRMEEIEKQRHVLEARIKEKATDIKETSQKCKQKQDIIEKKDKQIEELQ
QALTVKQNEEHDRQRRISNTRKMIEDLQNELKSAENCENLQPQIDAITNDLRRVQDEKAL
CEGEVIDKRGEKESLEKERKSVGDNIVRFDNLMNQKEDKLRQRYRDTYDAVLWLRNNRDK
FKQRVCEPIMLTINMKDNKNAKYIENHISSNDLRAFVFESQEDMEVFLKEIRDNKKLRVN
AVIAPKSSYADKAPSRSLNELKQYGFFSYLRELFDAPDPVMSFLCCHYHIHEVPVGTERT
RERIERVIQETRLKQMYTAEEKYVVKTSFYSNKVISSNTSLKVAQFLTVTVDLEQRRHLE
EQLKEINRKLQAVEAGLIALCERNKHLEHKDNELRQKKKELLERKTKKRQLEQKISSKLG
SLKLMEQDACNLEEEERKASTKIREINVQKAKLVTELTNFVKICTSLHIQKVDLILQNTT
VISENNKLESDYMAASSQLRVTEQHFIELDESRQRLLQKCKELMKRARQVCNLGAEQTVP
QEYQTQVPTIPNGHNSSPPMAFQDLPNTLDEIDALLTEERSRASCFTGLNPTVVEEYTKR
EEEIEQLTEELKIKKVELDKYKENISQVKERWLNPLKELVEKINEKFSNFFSSMQCAGEV
DLHTENEEDYDKYGIRIRVKFRSSTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFR
VVDEINQGMDPINERRVFEMVVNTACKENTSQYFFITPKLLQNLPYSEKMTVLFVYNGPH
MLEPNRWNLKAFQRRRRRITFTQPSQ
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccgagcaggaagacgtcggccccgagcacactggcctccaagagagctctc
ccgagagatccctcatcggaggtcccgagcaagagaaagagttcggccccgccggcggcg
ccgccgccactgccgctgcagtcgtccaggcctttcgtggaaggctctatcgtccgcatc
gtgatggagaacttcttaacgtatgatgtctgtgaagtatctcctggacctcatctgaat
atgattattggagctaatggaacaggaaagtctagcatcgtgtgtgccatttgtcttgga
ttagcaggcaaacctgcttttatgggacgggcggataaggttggtttttttgtgaagaga
ggatgttccaaaggaatggttgaaattgaattgttcagaacttctggaaatcttgtaatc
acccgtgagattgacgtggcaaaaaatcagtcttcttggttcatcaacaaaaaatctaca
acccagaaagtagtagaagagcaagtcgcagccttaaacattcaagtgggcaatctgtgc
caatttctacctcaggataaagttggagaatttgctaaactgagtaaaattgaactcctt
gaagccactgagaagtctattggtcctccagaaatgcacagataccattgtgaactcaaa
aacttcagggagaaagaaaaacaactagagacctcatgcaaagagaaaactgagtatcta
gagaaaatgattcagaggaatgaaagatataaacaagatgtggagaggttctatgaacgt
aagcgacatttagatttgattgagatgcttgaagctaaaaggccgtgggtggaatatgaa
aatgttcgtcaggagtatgaagaagtaaaactagctcgagaccgagcgaaggaagaggtg
agaaaacttaaagaagggcagatccccattacccgtcgaatggaagaaattgagaagcag
cgtcacgttttggaggctcgaatcaaagagaaggcaacagatattaaagagacctctcaa
aaatgcaaacaaaagcaagatattatagaaaagaaagataaacagattgaggagcttcag
caggcattaaccgtaaagcagaacgaagaacacgaccgccagaggaggataagtaacact
cggaagatgatagaggatttgcaaaatgaactgaagagcgcagaaaactgtgagaatctt
cagccccagattgatgccattacaaatgatttgagacgagttcaagatgaaaaggcatta
tgtgaaggcgaggtaattgataagcgaggagagaaggagagcctagagaaggagagaaag
agtgtgggtgataatattgtacgatttgacaatcttatgaatcagaaggaagataagctg
agacaaagataccgtgacacatacgatgctgttctgtggctaagaaataaccgggacaaa
tttaagcaaagagtctgtgagcctataatgctcacgatcaatatgaaagataataaaaat
gccaaatatattgaaaatcatatttcatcaaatgacctgagagcttttgtatttgagagt
caagaagatatggaggttttcctcaaagagattcgtgacaataaaaaattaagagtaaat
gccgtcattgctcccaagagctcatatgcagacaaagcaccttcaagatctctgaatgag
ctaaaacagtatggatttttctcttacttgcgagaattatttgacgcacctgatcctgtc
atgagcttcctttgctgccattatcatattcatgaagttcccgtaggaactgaaaggacc
agagagagaattgaacgggtaatacaagaaacccggttaaagcaaatgtatacagcagaa
gaaaagtatgtggtgaaaacttccttttattcaaataaagttatttctagtaacacatcc
ctaaaagtagcccagtttctcacagtcactgtggatctagagcaaagaagacacttagaa
gaacagctaaaggaaattaatagaaaattgcaagcagtggaagcagggttaattgcctta
tgtgagagaaacaaacatctggaacacaaagacaatgaacttagacaaaagaagaaggag
cttcttgaaaggaaaaccaagaaaagacaactggaacaaaaaattagttccaaactagga
agtttaaagctgatggaacaagatgcttgcaaccttgaagaggaagagcgtaaagcaagt
accaaaatcagagaaataaatgttcaaaaagcaaaacttgttactgaattaacaaacttt
gtaaagatctgtacttctttgcatatacaaaaagttgatttaattcttcaaaatactaca
gtgatctctgagaacaacaaattagaatcagattacatggctgcttcatcacagctccgc
gtcacagagcaacatttcattgagctggatgaaagtcgacagagattactgcagaaatgc
aaggagctgatgaagagagctaggcaagtatgtaacctgggtgcagagcagacagttcct
caagaataccagacacaagtacccaccattccaaatggacacaactcctcaccccccatg
gctttccaggatcttccaaacacattggatgagattgatgctttattaactgaagaaaga
tcaagagcttcttgcttcacaggactgaatcctacagtcgttgaagaatacacaaaaaga
gaagaagaaatagagcaattaactgaggaactaaagataaagaaagttgaactggataaa
tacaaggagaacatttcacaggtgaaagaaaggtggcttaatcctttaaaagagcttgta
gaaaaaattaatgaaaaattcagcaattttttcagctctatgcagtgtgctggtgaagtt
gatctacatacagaaaatgaggaagactatgataagtacggaattcgaattcgagtcaag
ttccgcagcagtacgcagctgcacgagttgacgccgcaccatcagagcggaggggagagg
agcgtttccaccatgttgtacttgatggcgctgcaggagctgaatcggtgtccgtttaga
gtcgttgatgaaatcaatcagggaatggacccgatcaatgaacggagagtgtttgaaatg
gttgtaaatactgcttgtaaagaaaatacctctcagtacttctttattacgccaaagctc
ctgcaaaatctcccttattctgaaaaaatgacggtgttgtttgtctacaacggtccccac
atgctggaacctaacagatggaatttaaaggctttccaaaggcggcggcgccgtatcacg
ttcacgcaaccttctcaataa
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integrated database retrieval system
