Ailuropoda melanoleuca (giant panda): 100484536
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Entry
100484536 CDS
T01329
Symbol
RNFT1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100484536 (RNFT1)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100484536 (RNFT1)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100484536 (RNFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-rbx1
Prok-RING_4
zf-C3HC4_4
zf-RING_6
zf-RING_16
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100484536
NCBI-ProteinID:
XP_002923358
Ensembl:
ENSAMEG00000011384
LinkDB
All DBs
Position
13:12904961..12917352
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AA seq
398 aa
AA seq
DB search
MQANCSQLHSPSGAAGNENASASQCVHTKLTREGSCLHSGDVHIQINSIPKEYAENPTSR
NTSSGVHSYTHGCIHSRLRSHSHNEARQPDDTATESGDHGSSSFSEFRYLFKWLHKSLPY
ILILGVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERCSKIQCAWLLVFLAGSSV
LLYHTFHSQSLYYSLIFLNPTLDHSSFWEVLWIVGITDFILKFLFMGLKCLILLMPSFIM
PFKSKGYWYMLLEESCQYYRTFVPIPVWFRYLISYGEFGNVTRRSLGILLALLYLILKLL
DFFGHLRTFRRVLQIFFTRPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEE
CITLWFNREKMCPLCRTVISDHINKWKDGATSSYLQIY
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaactgtagccaattgcacagcccttcaggagctgcaggcaatgagaatgcc
tcagcctcccaatgtgtccatacaaaattgacaagagaaggttcttgtcttcattctgga
gatgttcatatccagataaactccatacctaaagaatatgctgaaaatccaacctccaga
aatacaagttcaggtgtccatagctatacccatggatgtatacacagtcgcttacggagt
cactcccacaatgaagcaaggcaacctgatgatactgccacagagtctggagatcatggt
agtagctccttctcagaattccgctatctcttcaagtggttgcacaaaagtcttccatat
attttgattctgggtgtcaaacttgttatgcagcatataacaggaatttctcttggaatt
gggctgcttacaacttttatgtatgcaaacaaaagcattgtaaatcaggtttttctaaga
gaaaggtgctcaaagattcagtgtgcttggttactggtattcttagcaggatcttctgtt
cttttatatcacacctttcattctcagtcactttattacagcttaatttttttaaatcct
actttggaccattcaagcttctgggaagtactttggattgttggaattacagacttcatt
ctgaaattcctcttcatgggcttaaaatgccttattttgttgatgccttctttcatcatg
ccttttaaatccaagggttactggtacatgcttttagaagaatcatgtcagtattaccga
acttttgttcccataccagtttggtttcgttaccttataagctatggggagtttggtaat
gtaactagacggagtcttgggatattgctggctttactctacctcatactaaaacttttg
gacttttttggacatctgagaactttccgacgggttttgcaaatattttttacacgacca
agttatggagtggctgccagcaagagacagtgttcagatgtggatgacatttgttcaata
tgtcaagctgaatttcaaaaaccaattctgctcatctgtcagcatatattttgtgaagaa
tgtattaccttatggtttaacagagagaaaatgtgtccactgtgccgaactgtgatctca
gaccatataaacaaatggaaagatggagccacttcatcctaccttcaaatatattaa
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