KEGG   Ailuropoda melanoleuca (giant panda): 100484551
Entry
100484551         CDS       T01329                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C isoform X3
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aml01009]
    100484551 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100484551 (KDM5C)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100484551 (KDM5C)
Protein phosphatases and associated proteins [BR:aml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100484551 (KDM5C)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100484551 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD
Other DBs
NCBI-GeneID: 100484551
NCBI-ProteinID: XP_002926836
Ensembl: ENSAMEG00000005133
LinkDB
Position
X:complement(43915221..43949093)
AA seq 1557 aa
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEESGGDVKVESTSPKTFLESKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPSSELLQRLKNCLSEAEACVSQALGLVSGQEAGP
HRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEVYQAEAREALASLPSSPGL
LQSLLERGQQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
APSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSATASSATSVCVCGQVPAGVGAL
QCDLCQDWFHGRCVSVPRLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRERLQAEPK
SEEPSTYPSAPASDPLREGSGKDMPKVPGLLENGDSVTSPEKVAPGEGSDLELLSSLLPQ
LTGPALELPEATRAPLEELMLEGDLLEVTLDENHSIWQLLRAGQPPDMERIRTLLELEKA
ERHGSRARGRALERRRRRKVDRGGEGDDPAREELEPKRVRSSGPEAEEAQEEEELEEETG
GEGPPQPLPTTGSPSTQENQNGLEPALGATSGPSAPFSTLTPRLHVPCPQQPPQQQL
NT seq 4674 nt   +upstreamnt  +downstreamnt
atggagccggggtccgacgacttcctgccgccgccggagtgcccggtgttcgagcctagc
tgggccgagttccgagaccctctgggctacatcgcgaaaatcaggcccatcgccgagaag
tcgggcatttgcaagatccgcccacccgcggactggcagccaccctttgctgtagaagtg
gacaacttcaggtttactccccgaatccagagactgaatgaactagaggcccagacaaga
gtgaagctgaactacttggaccagattgccaaattctgggaaatccagggctcctcctta
aagattcccaatgtagaacggcggatcttagacctctacagcctcagcaaaatcgtggtg
gaggaaggtggctatgaagccatctgcaaagaccgtcggtgggcccgggtggcccagcgc
ctcaactacccaccaggcaaaaacattggctccctgctacgctcccactatgaacgcatc
gtttacccctatgagatgtaccagtctggagccaacctggtgcagtgcaacacacgtcca
tttgataatgaggaaaaggacaaggaatacaaaccgcacagtatcccccttcgacagtct
gtacagccttccaagttcaatagctatggccggcgggccaagaggctgcagcctgacccg
gaacccacggaggaagacattgaaaagaatccggagctgaagaagctacagatctatggg
gcaggccccaagatgatgggcctgggcctcatggccaaggataagaccctgcggaagaaa
gataaggaagggcctgagtgtccccccaccgtagtggtgaaggaggagtcaggcggggat
gtgaaggtggagtcaacctcacctaagaccttcctggagagcaaggaggagctgagtcac
agcccagagccctgcaccaagatgaccatgagactgcggaggaaccacagcaatgcccag
tttatcgagtcatatgtatgccggatgtgttcccgaggggatgaggatgacaagcttctg
ctgtgtgatggctgtgatgacaactaccacatcttctgcctgctgcctcctctgcctgag
attcccaagggtgtctggcggtgcccaaagtgtgtcatggcggagtgtaagcgcccccct
gaagcctttggctttgagcaggctacccgggaatacactctgcagagctttggcgagatg
gctgactcctttaaagccgattacttcaacatgcccgtgcacatggtgcctacagaactc
gtggagaaagagttctggcggctggtgaacagcattgaggaagatgtgactgttgagtat
ggggctgacatccattccaaagaatttggcagcggtttccctgtcagtgacagtaagcgg
cacctaacccccgaggaggaggagtatgccaccagtggttggaacctgaatgtgatgcca
gtgttggagcagtccgtactgtgccacatcaatgcagatatttccggcatgaaggtgccc
tggctctatgtgggcatggtcttctcagccttttgctggcatattgaggatcactggagt
tactccattaactacctccattggggtgagccgaagacctggtatggggtaccctctctt
gcggcggaacatttggaagaggtgatgaagaagctgacacctgagctctttgatagccag
cctgacctcctgcaccaacttgtcaccctcatgaatcccaacaccctcatgtcccatggt
gtgccggttgtccgcacaaaccagtgtgcaggagaattcgtcattactttccctcgtgct
taccacagtggcttcaaccaaggctacaactttgcagaggctgtcaacttttgcactgct
gattggttgccggctgggcgccagtgcattgagcactaccgccggctccgaagatactgt
gtcttctcccatgaggagctcatctgtaagatggctgcctgcccagagaagctggacctg
aacctggcagcggctgtgcataaggagatgttcatcatggtgcaggaggaacggcgtcta
cgaaaggccctgcttgagaagggcatcacagaagctgagcgagaggctttcgagctgctc
ccagatgatgagcgccagtgcatcaagtgcaagaccacgtgcttcctatcagccctggcc
tgctatgactgcccagatggccttgtctgcctttcccacatcaatgacctctgcaagtgc
tccagtagccggcagtacctgcggtatcgatacaccttggatgagctccctgccatgctg
cataagctgaaggttcgggccgagtcctttgacacctgggccaacaaagttcgagtggcc
ctggaggtggaggatgggcggaagcgcagccttgaagagctgagggcactagagtccgag
gcccgtgagcggaggtttccgagcagtgagctgctgcagcgactgaagaactgcctgagc
gaggcggaggcttgcgtgtcccaggctctgggactcgtcagtggccaggaggccggcccc
cacagggtggctggtctacagatgaccctggctgagctccgggcctttctggaccagatg
aacaacctgccttgtgccatgcaccagattggggatgtcaagggtattctggaacaggtg
gaggtctaccaggctgaggcccgtgaggccctggcctcactgccctccagtccagggcta
ctgcagtccctgttggagagggggcagcagctgggggtggaggtgcctgaggcccagcag
ctccagcggcaggtggagcaggcgcgatggctggatgaggtgaagcgcacactggccccc
tcagcccgaaggggcaccctggctgtcatgcggggactgttggtcgcgggtgctagtgta
gcccctagccctgctgtcgataaggcccgggctgagctgcaggagctgctgaccattgct
gaacgctgggaggagaaagcccacctctgcctggaggccaggcagaagcatccaccagcc
acactcgaggccataatccatgaggcagaaaacatccctgttcacctgcccaacatccag
gctctcaaagaggctcttgctaaggcccgggcctggattgctgatgtggacgagatccag
aatggtgaccactacccctgcttggatgacttagagggcctggtggctgtgggccgggac
ctacctgtggggttggaggagctgagacagctagagctgcaggtactgacagcgcactcc
tggagggagaaggcctccaagaccttcctcaagaagaattcttgctacacactgctggag
gtgctctgcccgtgtgcagacgctggctcggacagcaccaaacgcagccggtggatggag
aaggagctggggttgtacaaatctgacacggagctgctgggactgtctgcacaggatctc
agggacccaggctctgtgatcgtggccttcaaggagggggaacagaaggagaaggagggt
atcctgcagctgcgtcgcaccaactccgccaagcccagtccactggcatcatcagccaca
gcttcctctgcaacctctgtgtgtgtgtgtgggcaggtgccggctggggtgggagctctg
cagtgtgacctgtgtcaggactggttccatgggcgatgtgtgtcggtaccccgcctcctc
agctccccgaggcccagtcccacctcttccccactgctggcctggtgggagtgggacacc
aaattcttgtgtccgctgtgcatgcgctcacggcgcccgcgcctggaaaccatcctggca
ctgctggtagccctgcagagactgcctgtgcggctgcccgagggcgaggctctgcagtgt
ctcacagagagggccatcagctggcaaggccgtgccaggcaggctttggcctctgaggat
gtgactgctctgttgggacggctggctgagcttcgcgagcggctgcaggctgaacccaag
tctgaggaaccctctacctacccttcagcccctgcctctgaccctctcagagaaggcagt
ggcaaggatatgcccaaggtcccaggcttactggagaacggagacagtgtgaccagtcct
gagaaggtagccccgggggagggctcagacctggagctgctatcctcactgttgccacag
ttgactggccccgcattagagctgcctgaggcaacccgggcccctctggaggagctcatg
ttagaaggggacctgcttgaggtgaccctggatgagaaccacagcatctggcagctactg
cgggctgggcagcctccagacatggagcggatccgcacacttctggagctggagaaggca
gagcgccatgggagccgggcacggggccgggcattggagaggcggcgacggcggaaggtg
gatcggggtggggagggcgacgacccagcccgagaggagctagagccaaagagggtacgg
agctcagggccagaggccgaggaggcccaggaggaggaggagctggaggaggagactggg
ggtgagggccccccccaacccctgcccaccactggcagccccagcacccaggagaaccag
aatggcttggagccggcactaggggccacttcaggcccttcggcccctttctctactctg
actcctcggctgcatgtgccctgcccacagcagccacctcagcaacagttgtga

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