Ailuropoda melanoleuca (giant panda): 100484573
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Entry
100484573 CDS
T01329
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100484573 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100484573 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aml04147
]
100484573 (USP13)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100484573 (USP13)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100484573 (USP13)
Ubiquitin system [BR:
aml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100484573 (USP13)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100484573 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
UBA_3
UBA_HYPK
UBA_8
Motif
Other DBs
NCBI-GeneID:
100484573
NCBI-ProteinID:
XP_002912504
Ensembl:
ENSAMEG00000010896
UniProt:
G1LWS5
LinkDB
All DBs
Position
1:complement(83725983..83835375)
Genome browser
AA seq
863 aa
AA seq
DB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPNGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQETGMKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSEIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEEIVAIITSMGFHRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
RVCASERPPKDLGYMYFYHRVPR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggcagcggcagcaggaagatggct
gcaggagacatcggcgagctgctggtgcctcacatgcccacgatccgcgtgcccaggtcg
ggggacagggtgtacaagaacgagtgcgccttctcgtacgactcccccaattctgaaggt
ggactctatgtatgcatgaatacatttttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtatacatgcacctgaaaagacacgtgcgagagaaggta
agaggggcatctggtggagctttaccgaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggta
acaattgcttgtgatgcggttctcagctcaaaatctccatatagaaagcaggacccagac
acatgggaaaatgaattgccagtatccaaatacgccaataaccttacccagttggacaat
ggagtcaggattcctccaaatggttggaagtgtgccaggtgtgacctgcgggaaaacctc
tggttgaatctgaccgatggctccgtgctgtgtgggaagtggttctttgacagctctgga
ggcaacgggcacgcactggagcattacagagacatgggctaccctctagccgtgaagctg
ggaaccatcacccctgatggggcagatgtttattcttttcaagaagaagaaccggttttg
gatcctcatttggccaagcacttagcacattttggaattgatatgcttcatatgcatggg
acagagaacgggcttcgggacaatgacatcaagcctcgggtcagcgagtgggaagtgatc
caggagacagggatgaagctgaaacccatgtatggccccgggtacacggggctcaagaat
ctgggcaacagctgctacctgagttccgtcatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtagggaatcttccaagaatatttgactactctcctttagatccaaca
caggacttcaacacacagatgactaagttaggacatggccttctctcgggccagtattca
aaacctccagtgaaatctgaactcattgaacaggtgatgaaggaggaacacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtaagcaagagccaccccgaattc
tcctctaatagacagcaggatgcccaggagtttttcttgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagaacgt
attcagtgctgtcagacgcgcaaagttcgctacacggagagggtggattacctgatgcag
ttacctgtggccatggaggcggcaaccaacaaggatgagctgattgcctatgagttaacg
agaagggaagcggaagcaaacagaagaccccttcccgagttggttcgtgccaagataccc
tttagtgcctgccttcaggccttttctgaaccagagaacgtagatgatttctggagcagc
gccctacaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctattgatatgccagacctacttgatatcaaccatctccgagccagggggttacag
ccaggagaggaggagcttccggacatcagcccccctatagtcattcccgatgactcaaaa
gatcgcctgatgaatcaactgatagacccctcagaaattgatgagtcatcagtgatgcag
ctggccgagatgggtttccccctagaagcgtgtcggaaggctgtgtactttactggaaat
atgggagctgaagtggccttcaactggatcatcgttcacatggaagagccagattttgcc
gaaccgctgaccatgcctggttatggaggagcagcttctgctggagcctctgtttttggt
gctactggactggataaccaacccccggaggaaattgtagctatcattacctccatggga
ttccatcgaaatcaggctgttcaggcgctgcgagccacgaataataacctggaaagagca
ctggattggatctttagtcaccctgagtttgaggaggacagtgactttgtgattgagatg
gagaataacgccaatgcaaacattatttctgaggccaagcctgaaggacctagagtcaaa
gatggatctggaatgtatgaattatttgcattcatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatattaaaaaggaaggaagatgggtgatctacaatgaccac
agagtgtgtgcctcagagaggccccccaaggacctgggctacatgtacttttaccacagg
gtgccacgctga
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