Ailuropoda melanoleuca (giant panda): 100484717
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Entry
100484717 CDS
T01329
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100484717 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100484717 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
DUF240
Motif
Other DBs
NCBI-GeneID:
100484717
NCBI-ProteinID:
XP_034504457
Ensembl:
ENSAMEG00000001988
LinkDB
All DBs
Position
20:18135933..18367236
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AA seq
719 aa
AA seq
DB search
MEKFLLYLFFIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNASSSNGDTKLSQDK
IVIAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVALPQSMSKQAVGHEENA
QCCKVANDNGIQSSETCSSQDSSTTTSALPPTWTPSASVPQKQKRKTGPKPSAEPQNEAV
TNAESQNTNRNNSTALQLASRPPDSVTEGPTSKRAHSKPNALLTNVDQIVQETQRLELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttcttttgtatctgtttttcattggcatagcagtgagagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttttatttgttccaccaaacattgacagaagaactgtggaactgcggttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacacctcatgcttttgctgacttacgaaat
ttgagggcattgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
gggctttccaatctccatcatttgatactgaacaacaatcaactgactttaatttcttct
acagcatttgatgatgtctttgcccttgaggagctggatctgtcctacaataatttagaa
acaattccttgggacgctgttgagaagatggttagcttgcacacacttagtttggatcac
aatatgattgataacattcctaaggggactttctcccacttgcacaagatgactcggcta
gatgtaacgtcaaataaactgcagaagctaccacctgaccctctctttcagcgagctcag
gtactagcaacctcaggaataatcagcccatcaacttttgcattaagttttggtggaaac
cctttgcattgcaattgtgaattgttgtggttgaggcgtctgtccagagaagatgaccta
gagacttgtgcttctccagcacttttaacaggccgctatttttggtcaattcctgaggaa
gagtttttatgtgagcctcctctcattactcgtcatacacatgagatgagagtcctggaa
ggtcaaagggcaaccctgcggtgcaaagccaggggggaccctgaacctgccattcactgg
atttctcccgaagggaagctgatttcaaatgccacaagatctctggtgtatgataacgga
acacttgatattcttataacgactgtaaaggatacaggtgcttttacctgcattgcttcc
aatcctgctggggaagcaacacaaacagtggatcttcatataattaagctccctcactta
ctaaacagtacaaaccacatccatgagcctgatcctggttcttcagatatctcaacttct
actaagtcaggttcgaacgcaagcagtagtaatggtgatactaaactgagtcaagataaa
attgtaatagcagaagcaacatcatctaccgcgctacttaaatttaattttcaaaggaat
attcctggaatacgtatgttccaaatccagtacaatggtacttatgatgacacccttgtt
tacagaatgatacctcctacgagcaaaacttttcttgtcaataacctggctgctggaact
atgtatgacttgtgtgtcttggcaatatacgacgatggcatcacttccctcactgccaca
agagtcgtgggttgcatccagtttacgacggaacaggattatgtgcgatgccatttcatg
cagtcccagtttttgggaggcaccatgattattattattggtggaataattgtagcatct
gtgctggttttcatcatcatcctcatgatccggtacaaggtttgtaacaataacgggcaa
cacaaagtcaccaaggtcagcaatgtctactctcaaactaatggggctcagatacaaggc
tgcagtgtcgcgctgccccagtccatgtccaaacaagctgtgggacatgaagagaatgcc
cagtgttgtaaagttgccaatgacaatgggatacagtcttcagaaacttgttcaagtcag
gactcctctaccactacctctgctttgcctcctacctggactccaagcgcttctgtgccc
caaaagcagaaaagaaagactggcccaaagccaagtgccgaaccacagaatgaagctgtc
acaaatgccgagtcccaaaacactaacaggaacaactcaactgcattgcagttagctagc
cgacctcccgattcggtcacggaggggcccacatctaaaagagcacattcaaagccaaat
gctttgctgactaatgttgaccagattgtccaggaaacacagaggctggagttaatctga
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