KEGG   Ailuropoda melanoleuca (giant panda): 100484760
Entry
100484760         CDS       T01329                                 
Symbol
CDH13
Name
(RefSeq) cadherin-13 isoform X1
  KO
K06808  cadherin 13, H-cadherin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100484760 (CDH13)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100484760 (CDH13)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    100484760 (CDH13)
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Major cadherins
   100484760 (CDH13)
SSDB
Motif
Pfam: Cadherin Cadherin_pro Cadherin_3 Cadherin_4 Big_9 Cu-binding_MopE BACON_2 RibLong
Other DBs
NCBI-GeneID: 100484760
NCBI-ProteinID: XP_034528707
Ensembl: ENSAMEG00000006487
LinkDB
Position
12:75939685..76973229
AA seq 713 aa
MQPRTPLLLCVLLSQVLLLTSAEDLDCTPGFQQKVFHINQPAQFIEDQAILNLTFSDCKG
NNKLHYEVSSPYFKVNNDGSLVALKNITAVGKTLFVHARTPHAEDMAELVIVGGKDIQGS
LQDIFKFARTSPVPRQKRSIVVSPILIPENQRQPFPRDVGKVVDSDRPEGSKFRLTGKGV
DQEPKGIFRINENTGSVSVTRTLDRETMATYQLFVETTDVNGKTLEGPVPLEVIVIDQND
NRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFY
IDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIMIDDKNDHS
PKFTKKEFQATVEEGAVGVIVNLTVEDKDDPTTGAWRAAYTIINGNPGQSFEIHTNPQTN
EGMLSVVKPLDYEISAFHTLLIKVENEDPLVPDVSYGPSSTATVHITVLDVNEGPVFYPD
PMTVTRQENISVGSVLLTVNATDPDSLQHQTIRYSVYKDPAGWLNINPINGTVDTMAVLD
RESPFVHNSVYTALFLAIDSGNPPATGTGTLLITLEDVNDNAPFIYPTVAEVCDDAKNLS
VVILGASDKDLHPNTDPFKFEIHKQAVPDKVWKVSKINNTHALVSLLQNLNKANYHLPIM
VTDSGKPPMTNITDLRVQVCSCKNSKVDCNAAGALHFSVTSVLLVSLFSLACL
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgcagccgagaactccgctccttctgtgcgttctcctgtcccaggtgctgctgctaaca
tctgcagaagatttggactgcacgcctggatttcagcagaaagtgttccatatcaatcag
ccagctcagttcatcgaggaccaggcgattctaaacttgaccttcagtgactgcaaggga
aacaacaaactacactatgaagtctcaagcccatacttcaaggtgaacaatgatggcagc
ttagttgccctgaaaaacataactgcggtgggcaagactctgttcgtccacgcccggact
ccccatgcggaagacatggcagaactcgtgattgtcggggggaaagacatccagggctcc
ttgcaggatatatttaaatttgcaagaacttctcctgtcccaagacaaaagaggtccatt
gtggtatctcccattttaattccagagaatcagagacagcctttcccaagagatgttggc
aaggtagtcgatagtgatagaccggaagggtccaagttccggctcactggaaagggagtg
gatcaagagcctaaaggaattttcagaatcaatgagaacacgggtagcgtctccgtgaca
cggaccttggacagagaaacgatggctacttatcaactatttgtggagaccactgatgtc
aatgggaaaactctcgaggggccagttcctctggaagtcattgtgattgaccagaatgac
aacagacccatctttcgggaaggcccctacattggtcatgtcatggaaggatcgccaaca
ggaaccacagtgatgaggatgacagcctttgatgcggatgacccagccacagataatgcc
ctcctgcggtacaatatccgacagcagacgcctgacaagccatctccaaacatgttctac
atcgatcctgaaaaaggagacatcgtcactgtcgtgtcacctgccttgctggaccgggag
actctggaaaatcccaagtatgaattgatcatcgaggcccaagacatggctggactggat
gttgggttaacaggcacggccacagcgacaatcatgatcgatgacaaaaatgatcactct
ccaaaattcaccaagaaagagtttcaagccactgtcgaggaaggagccgtgggggttatt
gtcaacttgacagttgaggacaaggacgaccccaccacaggcgcgtggagggctgcctac
accatcatcaatggaaacccaggccagagtttcgagatccacaccaaccctcagaccaac
gaggggatgctgtccgttgtcaaacccctggactatgagatttccgcctttcacaccctg
ctgatcaaagtggaaaatgaggacccgctggtgcccgacgtgtcctatggccccagctcc
acggccaccgtccacatcaccgtcctggatgtcaacgagggtccggttttctacccagac
cccatgacggtgaccaggcaggagaacatctctgtgggcagcgtgctcctgactgtgaac
gccacggaccccgattccctgcagcatcaaaccatcaggtattctgtttacaaggaccca
gcaggctggctgaatattaaccccatcaatgggaccgttgacaccatggcagtgctggac
cgcgagtcgccattcgtccacaacagcgtgtacactgccctcttcctagcaatcgacagt
ggcaaccctcccgctactgggaccggaactttgctgatcactctggaggacgtgaacgac
aacgcccccttcatttaccccacagtcgctgaagtctgtgatgatgccaaaaacctcagc
gtcgtgattttgggagcgtcagataaggatcttcacccaaatacggaccctttcaaattt
gagatccacaaacaagctgttcccgacaaagtctggaaggtctccaagatcaataataca
cacgccctggtcagccttcttcaaaacctgaacaaagccaactaccacctgcccatcatg
gtgacagattcagggaaaccacccatgacgaacatcacagacctcagggtacaagtgtgc
tcctgcaagaactccaaagtggactgcaacgcggcaggggccctgcacttcagcgtgacc
tcagtcctgctcgtctccctcttcagtttggcttgtctgtga

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