Ailuropoda melanoleuca (giant panda): 100484918
Help
Entry
100484918 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-3
KO
K16494
protocadherin beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100484918
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
100484918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
100484918
NCBI-ProteinID:
XP_019651114
Ensembl:
ENSAMEG00000028223
LinkDB
All DBs
Position
3:28935685..28939008
Genome browser
AA seq
778 aa
AA seq
DB search
MEARGERFLRQRQVLFLFVFLGGSLAGSDSRRYSVFEETERGYLIANLAKDLGLGVGELA
VRGAQVVSKGNKQHFQLNHQTGDLLLHEKLDREELCGPTEPCILHFQILLQNPLQLVTNE
LQVIDVNDHSPVFFENEMQLKLLENTPPGTIIPLENAEDLDVGRNSLQNYTITPNSHFHV
LTRSRRDGRKYPQLVLDKALDREEQTELLLTLTALDGGSPPRSGIVQIHILILDINDNAP
EFTQSLYEVQILENSPINSVIVTVSASDLDTGNLGTVSYAFFHASEEIRKTFQLNPITGD
IQLVKYLNYEVLNTYEVDIEAKDGGGLSGKTTVIVQVVDVNDNPPELTLSSITSPIPENS
PETVVAVFSVSDLDSGDNGRIMCFIENNLPFMLKPSVENFYTLVTERPLDRETQAEYNIT
ITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRENNSPALHIGSVSATDRDA
GANAQVTYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSP
ALSSQALVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQN
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLLVLVKDNGEPPLSASVTLH
VLLVDGFSQPYLPLPDVAAAEARADPLTVYLVIALASVSSLFLVSVLVFVAVRLCRRSRA
ASGGGCAVPEGPFAGHLVDVSGTGTLSHSYQYEVCLRGGSGTGEFKFLKPMSLVQDTE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagaggggagcgttttcttagacaaaggcaagtcctatttctctttgttttt
ctgggtgggtctctggctgggtctgactcaagacgctactctgtgtttgaggaaacagag
aggggctatttaatagctaacctagcaaaggatctagggctaggggtaggggaactggct
gtgaggggcgcccaggttgtgtctaaagggaacaaacagcattttcagctcaaccatcag
accggcgatttgctcctgcatgagaaattggaccgggaagagctttgcggccccactgag
ccatgtatactgcattttcagatattgctgcaaaaccctttgcagttagttacaaatgag
cttcaggtcatagatgtaaatgaccattctccggtattctttgaaaatgaaatgcagctg
aaactcttagaaaacacgccaccaggaaccataattcctttggaaaatgctgaggacttg
gatgtgggaagaaacagtctccaaaactacactatcactcctaattcccatttccacgtt
ctcacacgcagccgtagagacggaagaaagtacccacaactggtgctggacaaagcgcta
gaccgcgaggagcagacagagctccttttgacgctcaccgcgctggatggcggctctcca
ccccggtcgggaatcgtccagatccacatcctgatcttagacataaacgacaacgcccct
gaatttacacagtcactctatgaggttcaaattctagagaacagccccattaactctgtt
attgtcactgtctcagcttctgacttagatacaggaaatttggggacagtatcatatgca
ttttttcacgcttctgaagaaattcgcaaaaccttccagctaaatccaattactggtgat
atccagctagtcaaatatttgaattatgaggttttgaatacttatgaagtggacatagaa
gctaaggatggtggaggcctttccggaaaaaccacagtgatagttcaggtggttgatgtg
aacgacaacccaccagaactgaccttgtcctcaattaccagccctatccctgagaactcg
ccagagactgtggtggctgttttcagtgtttctgatctagactctggagacaatgggaga
attatgtgtttcatcgagaacaatctccccttcatgctcaaaccatccgtagaaaatttt
tacaccctagttacagagagaccactcgacagagagacccaggccgagtacaacatcacc
atcaccgtcaccgacctggggacccccaggctgaaaacccagcacaacttaaccgtgacg
gtgtccgacgtcaacgacaacgcccccgccttcagccaaagctcctacaccctgcgggtc
cgcgagaacaacagccccgccctgcacatcggcagcgtgagcgccaccgacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgctgccgccccacgacccgcacctgccc
ctggcctcgctggtgtccatcaacgcggacaacgggcagctgttcgcgctcagggcgctg
gattacgaggcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgccc
gcgctcagcagccaggcgctggtgcgcgtgctggtggtggacgacaacgacaacgcgccc
ttcgtgctgtacccgctgcagaacggctcggcgccctgcaccgagctggtgcccagggcg
gccgaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcg
cacaacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacagg
ctgctggtgctggtcaaggacaatggcgagccgccgctgtcggccagcgtcacgctgcac
gtgctgctggtggacggcttctcgcagccctacctgccgctgccggacgtggcggcggcc
gaggcccgggccgacccgctcaccgtctacttggtcatcgccttggcgtcggtgtcgtcg
ctcttcctggtgtcggtgctggtgttcgtggcggtgcggctgtgcaggaggagccgggcg
gcgtcggggggcggctgcgcggtgcccgagggcccgtttgcgggccacctggtggacgtc
agcggcacggggaccctgtcccacagctaccagtatgaggtgtgtctgaggggaggctca
gggaccggcgagttcaagttcctcaagcccatgagtctggttcaagacactgagtga
DBGET
integrated database retrieval system
