Ailuropoda melanoleuca (giant panda): 105234861
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Entry
105234861 CDS
T01329
Symbol
SIX3
Name
(RefSeq) homeobox protein SIX3 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
105234861 (SIX3)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105234861 (SIX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
105234861
NCBI-ProteinID:
XP_034514965
Ensembl:
ENSAMEG00000028787
LinkDB
All DBs
Position
4:71228843..71243302
Genome browser
AA seq
379 aa
AA seq
DB search
MNIYPPLLPAPGFPYLSAGQSMVFRSPLDLYSSHFLLPNFADPHHRSLLLASSGGGNGAG
GGGGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGAGGAGGGGSGGGSRAP
PEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILR
ARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRV
RKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNW
FKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAASPTTSVSSLTER
ADTGTSILSVTSSDSECDV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttatccgccgctgcttcctgctcccggcttcccttacctttccgcaggtcag
tccatggtattccgctcccccctagacctctattcctcccacttcttgttgccaaacttc
gccgatcctcatcaccgctccctacttctggcgagtagcggcggcgggaacggtgcgggc
ggcggcggcggcgcgggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncg
ggaggcggcggtgctggcggagcaggcggcggcggcagcggcggcggctccagggccccc
ccggaagagttgtccatgttccagctgcccaccctcaacttctcgccggagcaggtggcc
agcgtctgcgagacgctggaggagacgggcgacatcgagcggctgggccgcttcctctgg
tcgctgcccgtggcccccggggcgtgcgaggccatcaacaagcacgagtcgatcctgcgc
gcgcgcgccgtggtcgccttccacacgggcaacttccgcgacctctaccacatcctggag
aaccacaagttcaccaaggagtctcacggcaagctgcaggccatgtggctggaggcgcac
taccaggaggccgagaagctgcgcggccgcccgctcggcccggtggacaagtaccgcgtg
cgcaagaagttcccgctgccgcgcaccatctgggacggcgagcagaagacgcattgcttc
aaggagcggactcggagcctgctgcgggagtggtacctgcaggacccctaccccaacccc
agcaagaaacgcgaactggcgcaggccaccggcctcactcccacacaagtaggcaactgg
tttaagaaccggaggcagcgcgaccgcgccgcggcggccaagaacaggcttcaacaccag
gccatcggaccgagcggcatgcgttcgctggccgagcccggctgccccacgcacggctcg
gcagagtcgccgtccacggcggccagccccaccaccagcgtgtccagcctgacggagcgc
gcggacaccggcacctccatcctctcggtaacctccagcgactcggaatgtgatgtatga
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