Ailuropoda melanoleuca (giant panda): 105234868
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Entry
105234868 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105234868
03015 mRNA surveillance pathway
105234868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
105234868
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105234868
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105234868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105234868
NCBI-ProteinID:
XP_034494776
Ensembl:
ENSAMEG00000001987
LinkDB
All DBs
Position
12:complement(68834498..68851906)
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AA seq
518 aa
AA seq
DB search
MTSPSVGLELGLLQPQGAHDRAAPASESASTSVSPAPGTMATDSWALAVDEQEAAAESLS
NLHLKEEKIKPDANGAVVKTNANAEKADEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQ
RDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSG
TGKTAAFVLAMLSQVEPAHRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGN
KLERGQKISEHIVIGTPGTVLDWCAKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ
RMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKF
QALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFRE
GKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVN
MVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccctcggtgggactggagctgggcttgctgcaaccccagggagcccacgat
cgcgccgccccagccagcgagtctgccagcaccagcgtctcaccggcgcctgggaccatg
gccaccgactcgtgggccctggcggtggacgaacaggaggcggcggctgagtcgttgagc
aacttgcatcttaaggaagagaaaatcaaaccagatgccaatggtgctgttgtcaagacc
aatgctaatgcagagaaggcagatgaagaagagaaagaggacagagctgcccagtcctta
ctcaataagctgatcagaagcaaccttgtggataacacaaaccaggtggaagtcctgcag
cgggacccaaactccccgctctactcagtgaaatcatttgaggagcttcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaaccgtccatccaagatacaagagaat
gcactgcctttgatgcttgctgagcccccacagaacttaattgcccagtctcagtctggc
actggtaaaacagctgcctttgtgttggccatgctcagccaagtagaacctgcacacaga
tacccccagtgtctgtgcctctccccaacttatgagctcgcccttcaaacaggaaaagtg
attgagcagatgggcaaattttaccctgaactgaagctagcttatgctgtccgaggcaat
aaattggaaagaggtcagaagatcagtgagcacattgtcattggcacccctgggactgtt
ctggactggtgcgccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggctgacgtgatgatagctactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctctgccaccttcgaagactccgta
tggaaatttgcccagaaagtggtcccagacccaaacattatcaaactgaagcgtgaggag
gagaccttggacaccatcaagcagtattacgtcctgtgcaataacagagatgagaagttc
caggccttgtgtaacctctacggggccatcaccattgctcaggccatgatcttctgccat
acccgcaaaacagctagctggctggcagcagagctctcgaaagaaggccaccaggtggcc
ctgctgagtggagaaatgatggtggagcagagggctgcggtcatcgagcgcttccgagag
ggcaaagagaaggtgctggtgaccaccaacgtgtgtgcccgcggtattgatgtcgaacag
gtttctgtcgtcatcaactttgaccttcccgtggacaaggacgggaacccagacaatgag
acctacctgcaccggatcgggcggacgggccgctttggcaagaggggcctggcagtgaac
atggttgacagcaagcacagcatgaacatcctcaacagaatccaggagcattttaataag
aaaatagaaagactggacacggatgatttggacgagattgagaaaatagccaactga
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