KEGG   Ailuropoda melanoleuca (giant panda): 105234996
Entry
105234996         CDS       T01329                                 
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
  KO
K16474  intraflagellar transport protein 88
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:aml03037]
    105234996 (IFT88)
Cilium and associated proteins [BR:aml03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   105234996 (IFT88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_8 TPR_7 TPR_19 TPR_6 TPR_14 TPR_16 CFAP70_TPR_C ANAPC3 RMD1-3 TPR_11 TPR_10 TPR_17 TPR_CcmH_CycH DUF6340 TPR_9 ARM_TT21_4th ARM_TT21_5th TPR-S RPN7 ARM_TT21_C TPR_21 CFAP70_mid_TPR ARM_TT21_2nd TPR_15 HAT_PRP39_C TPR_Psidin_N DUF6584 TTC22_N TPR_INTS8 Coatomer_E
Other DBs
NCBI-GeneID: 105234996
NCBI-ProteinID: XP_034520849
Ensembl: ENSAMEG00000003252
LinkDB
Position
7:62387599..62504494
AA seq 614 aa
MYAEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMR
IKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAGFNLILSYFAVGDRDKMKKAFQKL
IAVPLEIDEDDKYISPSDDPHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVI
ETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFNQAVETLKMFEKKDSRVKS
AAATNLSFLYYLENEFTQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEA
LRNDSSCTEALYNIGLTYKRLNRLDEALDCFLKLHAILRNSAQVLYQIANVYELMEDPNQ
AIEWLMQLISVVPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYY
IDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVEC
LRFLVRLCTDIGLKEVQEYATKLKRLEKMKEIREQRIKSGRDSSGGSRGRREGSAGSDSG
QNCSASSKGERLSAKLRALPGTNEPYESSSNKEIGKCWCSPPSSYRHNRCLLCGSTWPSS
RKTKNCSQKKNRRG
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgtatgctgaagcactaaacacatatcaagttatagtgaaaaataagatgtttagcaat
gcagggagattgaaagtgaatatgggaaatatttatttaaagcaaagaaattattccaaa
gccattaaattctaccgaatggcactagatcaaattccaagtgtccataaagaaatgagg
attaaaatcatgcagaacattggtgttacatttataaaaactggtcagtattcagatgcc
attaattcatttgagcacatcatgagtatggcaccaaatctgaaggcaggtttcaaccta
attcttagttactttgctgttggagatcgagacaaaatgaagaaggcatttcaaaaattg
attgctgttccattagaaattgatgaagatgataaatatatttcaccaagtgatgatcca
catactaacttagtgattgaagctataaaaaatgatcatctaaggcaaatggaacgtgaa
aggaaagccatggcagaaaaatacatcatgacagctgcaaaactcattgctcctgtaatt
gaaacatcttttgctgtaggttatgattggtgtgttgaagttgtgaaagcttctcaatat
gtagagttagcaaatgatctggaaataaacaaagcaattacatacttgagacaaaaggac
ttcaaccaagctgtagagaccttaaaaatgtttgaaaaaaaggacagtagagtgaaaagt
gcagctgcaaccaacctctcatttctttattatttggaaaatgaatttacacaagccagc
agctatgcagatttagctgtaaactctgatagatataatccctcagctctgactaataaa
gggaatacagtttttgcaaatggtgattatgagaaagcagctgaattctataaagaggct
ctaagaaatgattcttcttgtactgaagcactttataatatcggccttacctataagagg
ctaaaccggctcgatgaagctttggattgtttcctgaaacttcatgcaatcttgagaaac
agtgcccaagttctttaccagatagcaaatgtatatgaattaatggaggatcccaatcaa
gctattgaatggttaatgcaattgatcagtgttgttccaacggattctagagctttgtcg
aaactaggagaattatatgatagtgaaggagataaatcccaagcatttcaatattactat
gagtcgtacaggtatttcccctctaacattgaagtcattgagtggcttggagcctattac
attgacacccagttttgtgaaaaagctattcaatacttcgaaagagcttctcttatacag
cctacacaagtgaaatggcagctgatggtggctagttgttttagaagaagtggtaactac
caaaaagcattagatacttataaggaaattcacagaaagtttccagaaaatgttgaatgt
ctgcgtttcttggttcgtctctgcacagatattggattaaaagaagttcaagaatatgca
acaaaactcaagagattggaaaaaatgaaagaaataagagaacagcgcataaagtctggc
agagacagcagtgggggctcccgcggcagaagagaggggagtgccggcagtgatagtggc
cagaactgtagtgccagtagtaaaggtgaacgactaagtgccaaactcagagctttaccc
gggacaaatgaaccttatgaaagtagcagtaacaaagaaataggcaagtgctggtgttcc
ccgcccagttcctacaggcataacagatgcctcctatgtggatccacttggccctcaagc
agaaagaccaaaaactgcagccaaaaaaagaatcgacgaggatga

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