Ailuropoda melanoleuca (giant panda): 105237476
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Entry
105237476 CDS
T01329
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
105237476 (RP1L1)
04812 Cytoskeleton proteins [BR:
aml04812
]
105237476 (RP1L1)
Cilium and associated proteins [BR:
aml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105237476 (RP1L1)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
105237476 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
105237476
NCBI-ProteinID:
XP_019654850
LinkDB
All DBs
Position
5:complement(81293464..81307503)
Genome browser
AA seq
1954 aa
AA seq
DB search
MNSTLRDAQAPSHRECLLPSMARTPSVTQVTPAKKITFLKRGDPRFAGVRLAVDQRAFKS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLNALEQLEDGGCYLCSDKKPPKTPSRPGWPQ
GRNPSAQQLRDFESQHEAPGTSSSCNGPKAPRRIMLVKNGDPRIQQTVVLSHRNTRNLTA
FLSKASDLLHFPVKQVYTTSGKKVDSLKGLLHSPSVLVCAGYESFKPLAIEDSRRYGTET
LSGQTPRNKTGSWGPKAKQSVIHSRSGSGSRPRRFSLLSERSGLSNFPVSLHCAQMGPAP
DGQPQDMPAQLGPLVASDDVEKKVRMNEDGSLSVEMKVRFHLLGEDALLWSRRVGRASAL
TAASEEVPVLGEVDSFHCVWEDHPGGSLEPGAQGRGPCEAGCEEALSQGRWQPGSRYEIW
MNPLYSTQGEGTASQRRSRLTQHSHSRRPCSQGFTSRKRNSKDSVSPASSDRASKDSVPN
SSCCSRSSEGSVGSCDLHSASGAASQRGAGWEVGSPCGTSESPGPQGAGQGSRERHCCLK
PQTQDSAGALSDSSGSAGSHEESSERGEEHQGCLNKTRAVTTSRTKATQGEGPLSLRHKD
SQTEESGQGTTHSQAKGRSGIRPPLPLGHSGSGDTAEGHSLPSACVSDPGRRRKKGRASA
VSSPSISGLSRGAQLGCPKQHHTRRHTHCPCDSPVPRQIPGPPSGGRAHPDGPAPPLSAS
SPSARNQASQDREPSSPASLHSQYAQEVSSALITPVRNSCSASNFYPPYSPSAETEGDPE
FRACSPAPTPSNISDSVSNQADGLDKKSGGGIPKPSWPLVGQPEAGRPGTHRGCCCSTIS
TSLFPGTPSDKTHVLQTSQPLDSQGPFSEVCLVCSRYCPTPPRTWPFVKKHLLCSSSPGA
DWGPGGGQLREGKLDAWRPRPPGSQSGAMGKAVKDSRRGSSSCGLRSGRIFQGKVAGGGE
SLEWQEKDGRMALGALPRASPDAVVREWLSNIPEEPISMKCEMVGESTDVTRDDPEGPKE
DPVDKHSPACLGEPMQVRQLSHEGAANEKAEPVTGEACPRSGQGLPCSGVSEDSREAGSG
KGMAMDCGVGPCVLLHKVSASVQIMKALMGSKRGRPSSLPEVSSTAGRRLSRSAQALITC
LSGLRFFDEDLGSTTGQVRFIDSPRYQELLSTFQALWPGCGPRRGEPDSGLWELGWCQAL
PGLRSNIMTEDFTPTSSSGVDVGSGSGGSGEGSGPCAMECALVPESITLPLKISCQRPDS
RTSKNQEDPGNQQPSGSKAFSNSQAWACASREDEAERNSRGQVLGSNLDQGVENTMQEEE
VQLEKVREEKEITALQGEGVQGFPEKGRVMGQELSEVNSQEGEGAQEGKSIQKEEAGRDP
ASTILCPPGKREKPTELPKSFSEKDENASGPKLEPGLEKLPKAADTHHVQTQAKCTQGPG
ETSSSANRRVSLDPDPLWVSKLLRKMEKAFMAHLSSATAELRARWSLQSNPLLDQMVVEL
QQDLGRRLRESTENELWKIQSRAGGRTPGLAREALRWEMSLQTELRRRRLQGLRHLSAFS
GQAGSLGPLSFPSEEEASTLSGALGTWLVGEAEGEEFCPCEACMRKKAIPTSPKDTMGAS
RAPIRKAFDLQHILQKKKGGCASGEAAEKRGMEPLQGDPLGTGTVHGSDGGLELGLDQDP
GTEEGGEGESSQTLGRDGDPPGGEEEAAVQEREESTGAGQGNGPEGAGGEEQGSGGKGEN
MEEGSGADASLEGEASGGGDPSPRGQNNGVKTAETREAEGEGQPESGGGNQREKEGSLQV
GWGDGQPGETSGNSSPDQEGKTALPPTPGGHSPCQRSGWKAGLASSSISSLGNCSQLSQK
GSEEKPLNGDMRNIKEKPKGVPGPKRKITGMNLESSTSEQEGAPLGPRSSEQEAGEASGL
EAEKVVKTLAFTETRFKNLTLDRTDGFGQDDLDF
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccttgagggatgcccaggcccccagccaccgtgagtgcctcctgccttcc
atggcccggaccccctctgtcacccaggtcacgccagccaagaagataaccttcctcaag
cgaggggatccccggtttgctggggttcgcttggctgttgaccagcgcgctttcaagagc
tttggtgctctgatggacgagctctctcagcgtgtacctctctcctttggggtgcgttct
gtcaccacaccccggggcctgcatggcctcaatgccctggaacagctggaagatggtggc
tgctacctctgctctgataagaagccccccaaaacacccagtaggccaggctggccacaa
gggagaaacccatctgctcagcagttgagagattttgaaagtcagcatgaggcaccagga
acatcctcttcctgcaacggtcctaaggccccaaggaggataatgctggttaagaatgga
gaccctagaatccagcagacagtggttctcagccatagaaatacaaggaacctgacggcc
tttctcagcaaagcctcagatcttttgcactttcctgtgaagcaggtatacacgacgagt
gggaaaaaggtggactcactgaagggtctgctccacagtccctcagtgttagtatgtgct
ggctacgagtctttcaaaccactggcaatagaagattctagaagatatgggactgaaact
ttatctgggcagactccaagaaacaaaactggaagctgggggccaaaggcaaagcagagt
gtgatccactcaaggtccgggtcgggcagcaggccacggcggttttccttgctgtcagag
aggtctggtctcagcaacttcccggtgtccctgcattgtgctcagatgggccctgctcct
gacggacagcctcaggacatgcctgcccagctcggcccattggtggccagtgacgatgtt
gagaaaaaggtccgcatgaacgaggatggcagcctctctgtggagatgaaagtccgcttc
cacctacttggcgaggatgcgctcctgtggtccaggagggtggggagggccagtgccctc
acagcagccagtgaggaggtccctgtcctgggggaagtggactccttccactgtgtgtgg
gaggaccaccctgggggctccttggagcctggggcacagggacgggggccctgtgaggca
ggatgtgaggaagcccttagccaaggccggtggcagccaggatccaggtatgagatctgg
atgaaccccctgtactctacccagggagaagggacggcctctcagaggagatccaggctg
acccaacactcccattccaggaggccctgtagccaagggttcaccagcaggaaaagaaac
agcaaggacagtgtcagccctgcctccagtgacagagcctccaaagactctgtgccaaac
tcctcctgctgttccaggtcttcggagggcagcgtgggcagctgcgacctacattcagcc
tcgggggctgcctctcagaggggagcagggtgggaagttggcagcccatgcgggactagt
gagagcccaggtccacagggagcagggcagggcagcagggagcgccattgctgcctgaag
cctcaaacccaagactcagcaggtgctctttctgactcctcagggagtgctgggtctcac
gaggagtctagtgaaaggggtgaagagcaccagggctgcctgaacaagacaagggccgtg
actacttcccggacaaaggccactcagggggaaggccccttgtctttgaggcacaaggac
tcacagacagaggagagtggacagggtaccacacactcccaggctaagggtaggtctggg
ataagaccacccttgccactaggtcattctggctctggggacactgcagaaggccattct
ctaccttctgcctgtgtttcagacccaggtaggaggagaaagaagggcagagccagtgct
gtgtcctcacctagcatttctggcctcagccgaggggctcagctaggctgccccaagcag
caccacacccgaaggcatacccactgcccatgtgactcacctgtgcccaggcagattccg
ggacctcccagcggaggcagggcccacccagatggcccagcgccacccctctctgcaagc
tcacccagcgccaggaaccaggcctcccaggacagggagccatcctcccctgcttctctt
cattcccagtatgcccaggaggtcagcagtgctctcattacccctgtgaggaattcttgt
tctgcttccaatttctaccccccatactctccttctgctgagactgaaggggaccctgag
ttcagggcatgctcaccagctcccacaccttccaacatatcagactctgtgagcaaccaa
gctgatggtctggacaaaaagtcagggggtggcattcccaagccttcctggcctttagtt
ggacagcctgaggcagggaggccaggaacccaccgaggctgctgctgctcaacgatcagc
acatccctgttccctgggacccccagtgataagactcatgtcctgcagacctcccagcca
ctggacagccaggggcctttctctgaggtctgcttggtatgcagcagatactgtcccact
cccccaaggacatggccttttgtcaagaaacaccttttgtgcagcagcagccccggtgct
gactgggggccaggtgggggacagctgagggagggcaagcttgatgcatggcgaccgcgg
ccccctggctctcagtcaggggcgatggggaaagcagtcaaagactcgagaaggggcagc
tccagctgtggcctcaggtctgggagaatattccaggggaaggtggctggtggaggggaa
agcctggagtggcaagagaaagatggcagaatggcactgggtgctctgccccgagcctca
ccagatgctgtggtccgtgaatggctgagcaacatcccagaggagcccatatccatgaaa
tgtgagatggtgggtgagagtacagatgtgaccagggatgacccagaaggccccaaggag
gaccctgttgacaaacattccccagcatgtctaggggagccaatgcaggtcagacaactg
tcacatgaaggggccgccaatgagaaagccgagccagtgactggtgaagcttgtcccagg
tcaggacagggtcttccttgtagcggagtttccgaagactccagggaggctgggtcaggc
aaaggcatggccatggactgtggcgtgggcccttgcgtgcttctgcacaaggtctctgcc
tccgtacaaattatgaaggcactgatgggctctaagcggggccggcccagcagccttccc
gaagtgtccagcacagcaggcaggaggctcagccgctctgcccaggcccttatcacctgt
ctttctggactccgcttctttgatgaagaccttgggtctaccactggccaagtgaggttc
atagactctcctcggtaccaggagctcctgagcaccttccaggccctgtggccggggtgc
ggccccagaagaggtgagccagactcaggcctctgggagcttggctggtgccaggctctg
ccaggcctcaggtccaatatcatgactgaggacttcactccaacgtcctcatctggcgtg
gatgtcggcagtggctctggaggctcaggggagggcagcggaccctgtgccatggagtgc
gccctggtccctgagagcataacactgcccttgaaaatctcctgccagaggcctgattct
agaacctccaagaaccaagaggatccaggaaaccaacagccgagtggttccaaagccttt
tccaattcccaagcatgggcttgtgccagcagagaagatgaggcagagagaaacagtagg
gggcaggtgctgggcagtaacctggaccaaggagttgaaaacacaatgcaagaagaggag
gtacagctagagaaagtcagagaagaaaaagaaataacagcactgcaaggagagggtgtc
cagggattcccagaaaagggaagagtcatgggacaagaactgtcagaggttaactctcag
gaaggggagggtgcacaggaaggtaagagtatacagaaagaggaagcaggaagagaccct
gcctccactatactttgccctccagggaaaagagagaaacccacagagctccctaagagc
ttcagcgagaaggatgaaaatgccagtggccccaaacttgagcctggtttggagaagttg
cccaaagctgctgacacacaccatgtgcaaacccaggccaagtgcacccaggggcctgga
gagacgagctcttctgcaaaccgcagagtgtctctggaccctgatcccctctgggtgtcc
aagttgctgaggaagatggagaaggccttcatggcccacctctccagcgccacagctgag
ctccgagcccgctggagtctacagagcaaccccctgctggaccagatggtagtggagctg
cagcaggacctgggccggcggctgcgagagagcaccgagaacgagctctggaagatccag
agccgggcaggggggaggacgccggggctggcccgggaagccctcaggtgggagatgtcc
ctgcagaccgagctgcgtaggcgccgcctccagggcctgcggcacctgtcagccttctct
gggcaggctggaagcctggggcccctctccttcccctcagaggaagaagcatccaccctc
agcggagccctggggacctggctggttggggaggctgagggggaggagttttgtccctgt
gaggcctgcatgcggaagaaagcgatccccacgtccccgaaggacacaatgggggcatcc
agggcacccatcagaaaggccttcgacctgcagcacattctgcaaaagaagaaagggggg
tgtgctagtggggaggccgctgagaagagagggatggagccccttcagggggaccccttg
gggacagggactgtccacgggtccgatggaggcctggagctggggttagaccaggaccct
gggacagaggaggggggtgagggtgagagcagccagacccttggccgagatggagacccc
ccagggggagaggaggaagcagctgttcaggagagagaagaaagcacaggtgccgggcaa
ggcaatggcccagagggagcaggtggggaggagcagggctctggtgggaagggagaaaac
atggaagagggctctggggcggacgccagtttggaaggtgaagcctcgggaggaggtgac
ccaagtccaagaggacagaacaatggtgtcaaaactgcagagacccgggaagctgaagga
gaggggcagccagagtcagggggaggaaaccaaagggagaaagaaggtagcctgcaggtc
ggctggggagacggtcagccaggtgagacttctggaaacagcagcccagatcaagagggg
aagacggcactgccccctaccccaggtggacacagcccttgccaaaggtcaggctggaaa
gcaggccttgcctcctccagcatatcatctctgggaaactgttctcagctctctcagaaa
ggctctgaagaaaagcctttgaatggcgacatgaggaacattaaagagaagcccaaggga
gtacctggtccaaagagaaaaatcacaggcatgaatctggaaagctccacttctgagcaa
gaaggggcgcccttgggcccaaggtcttcagagcaggaggcaggtgaggcttctggccta
gaagctgagaaggtagttaaaactcttgcttttacagaaacgaggtttaaaaacctcacc
ctggacaggacagatggctttggccaagatgacttagatttctag
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