Ailuropoda melanoleuca (giant panda): 105242293
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Entry
105242293 CDS
T01329
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
105242293 (TDRD12)
Enzymes [BR:
aml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
105242293 (TDRD12)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Gene silencing
piRNA pathway
105242293 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105242293
NCBI-ProteinID:
XP_034528434
LinkDB
All DBs
Position
12:complement(42171934..42240477)
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AA seq
1306 aa
AA seq
DB search
MLEVRVLKIEDPGCFWVIINGCSPFLDHEVDYQKLNRAMNDFYNSMCQDVEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIGFCEDSTKIVPARKWDSAAIQYFQNILKAATQVEAKLCAVEED
TFEVYLYATIKNEKVCVNDDLVAKNFARYVSPKENKNVHSVEKSQLSVKSASFSSKLNPA
LTLWPMFLQGKDPQGMENSRGFTFLAQSLQHLWPKGVVGDLGPSAVILDKTIKYNMDSSR
GSPEKKSGKKQQCISLKDVNKCVKFSMYWPTKRGITIYAEPDIPTASTLCQKPNEKPLRL
AEKKEYNEKNGCVKLLQFLNPDPLRADGASELQQLQRLRSSSQQPLAVLRNRIEPCLSVD
ASPLSADLRKALQRNKFPGPSHAESYSWPPVARGWDVVVISHCGNDPLLYLPPVLTILQM
GGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLEDYSPSSRPLHPMLLIIGLHKDEAKNVK
LPRGCDIIVTTPHSLLRLLRYQSLLFLRLCHLILDEVEVLFVEANEEMFAILDNFKKNID
VEERESAPHQIVAVGVHWSRHIEQLVKEFMNDPYIVVTAMEEAALYGSVQQVVHLCLECE
KTSTLLQTLDFVPSQAQKTLIFTGSVAETEIVCKVVESSSIFCLKMHKEMVFNLKSVLEQ
WKKKLSSGSHIVLAVTDDCIPLLAITDATCVIHFSFPSSPKIFGGRLYCMSGHFQSSIEQ
GSPAEQGDKTKSVLLLTERNACHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDKKARR
PLCPYLKAFGFCKDKRICPDRHHVNPEIDMPRKLSNQALPTFGYIKIIPFYILNATHYFG
RIVDKQVDLYATLNAEMNEYFKGNSNKTTVEKVEKLGLYGVAEKTLFHRVQVLEMSQKED
TWGPDSVLVQFIDEGRTGLVTRDQLLRLPDGFHTLPPQAVEFIVCRVKPADNEVEWNPKV
TRYIHHKIIGKLHDAKVILALGNTVWIDPMVHITKLSNLKTSVIDYNVRTEILSTGMGID
NSEHVEQLRTLHEGAKMLHGAESLSQALAPSPVEDAACLQSPRPQDSGSERGVDSETKPE
NQKHETLSENPSDSSLHRATEPLKSFHPQIKWFQKDDVVVLKIRIRNVKDYKCKYFQDRV
IFSGWVGEKFYLADMELQANIVKDACKCTIMNEEPVITLAKETRGSWCSLLKQRNPNVAF
DFDHWEEKEEDSRFPQVANSTNRQCKVAELAESSDGPSDDDGSESE
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtgcgggtgctgaagattgaagatccaggatgcttctgggttattataaat
ggatgtagtccctttttagatcatgaagttgattatcaaaaactaaatagggccatgaat
gacttctataatagcatgtgtcaagatgtagaaataaaaccgttaatgttggaagaaggg
caggtctgtgtggtgtattgtcaggaactgaagtgttggtgcagggctgttattaagtcc
attgtgtcttcggcagaccattacctggcagaatgtttccttgtggattttgccaagtac
atcccagtgaaatcgaaaaacatccgagttgcagtggaaacttttatgcagcttccctac
cgagcgaaaaaattcaggctgtactgcacgaagcctgttacattacacattggcttctgt
gaagacagcactaagatcgtacctgccaggaagtgggacagcgcagctattcagtacttc
cagaacatcctaaaagcggccacgcaggtggaagccaaattatgtgctgtggaagaagat
acttttgaggtctacctttatgcaactataaaaaatgaaaaagtctgtgttaatgatgat
ctggttgcgaagaacttcgctcgttacgtatcacccaaggagaataaaaacgttcattct
gtagagaaatcacaattgagtgtaaagtcagcatccttttccagtaaactcaatccagca
cttactctttggccaatgtttttgcaaggaaaagatcctcaaggaatggaaaattcacgt
gggttcacttttctggctcagtccctccagcatctgtggcccaagggtgttgttggtgac
cttgggccaagtgctgtgatcctggataaaactataaaatataatatggattcgtcgaga
ggttcacctgaaaaaaaatctggaaagaaacaacagtgcatctccttgaaagatgtaaat
aagtgtgtcaaattctccatgtactggccaacaaagagggggataaccatatatgctgag
ccagatataccaacagcaagcactttatgtcagaagccaaatgagaaaccgctcaggttg
gccgagaagaaagaatacaatgagaagaatggctgtgtgaaattgttgcagtttttaaat
cctgatcctttgagagctgatggggcctctgagctgcagcagctgcagaggctgcgctcc
agctcccagcagcccttggctgtgctccggaacaggatcgagccttgcttgtccgttgac
gcgtcgccgctctcggcggacctgagaaaggctcttcaaagaaacaagttcccgggacct
agccatgcggaatcctactcttggcctcctgtagcccggggctgggacgtggtggtcatc
tctcactgtggaaatgatccgctgctgtacctgccaccagtccttacaattctgcaaatg
gggggctgctacaagtctttaccaagtagaaatggacctctggcagtcatcgtgtgccct
gggtggaaaaaggcccaattcatttttgaattactggaagactatagcccatcctccagg
cctcttcatcctatgttgctaataatcggactccacaaagatgaagccaaaaacgtgaag
cttccaagggggtgtgatatcattgttacgacaccccacagcctcctgagactcctccga
taccaaagcttgctgttccttagactctgtcacctcatcttggatgaggtggaggtgttg
ttcgtcgaagctaatgaagaaatgtttgctatattagataactttaaaaaaaatattgac
gttgaagaaagggaatctgcaccacatcagattgttgccgttggcgttcattggagcaga
cacatagagcagctggtcaaagagttcatgaacgacccctacatcgtggtcacggccatg
gaggaggccgcgctctacggcagcgtccagcaggtagtgcacctttgcctagaatgtgaa
aaaacctccactttactccagactctagatttcgttccaagtcaagcacaaaagaccttg
atcttcaccggttctgtagctgaaacagaaatagtgtgtaaggtagtagaaagcagttca
atattttgcttgaaaatgcataaagaaatggtttttaatttaaaaagtgttttagaacag
tggaagaagaagttaagttctggctctcacattgtattagccgtaacggatgattgcata
ccactcttggccatcaccgatgccacgtgtgtgattcacttcagctttccttcctccccc
aaaatttttggtggacgcctgtactgcatgtctggtcattttcagagttccatcgagcag
ggttcccctgcagaacagggagataagaccaagtccgtcttgctgctgacggagaggaac
gcgtgccacgcggttggcgtcctgcgctacctggagcgagcagatgccaagattccctcg
gagctgtatgagtttactgcaggggttctggaagccaaagaagataaaaaagccagaagg
cctctttgtccatatcttaaggctttcggtttttgcaaagacaaaaggatctgtcctgat
agacaccatgttaatccagaaatagacatgccaaggaaattatccaaccaagcactacca
acatttggatacatcaaaataatacccttctatattttgaatgcaacgcattacttcggt
cgtatcgttgataaacaagtggatctttatgcaactctgaatgccgaaatgaatgagtat
tttaagggtaatagcaataaaacgactgttgaaaaggtggagaaacttggattatatgga
gtagcagaaaaaacactttttcacagggtccaggtgctggagatgagccaaaaagaagac
acgtggggcccggacagcgtcctcgtacagtttatagatgaaggccggactggactcgtc
acgagagaccagctgctgcgtctcccggacggtttccacactctgcccccccaggcggtg
gagttcattgtttgcagggtgaaacctgctgacaatgaagttgagtggaatccaaaggtt
actaggtacattcatcataaaattattggaaaattgcatgatgccaaagtgatactggct
ttaggaaatacagtgtggatcgatcccatggtgcacattacaaaactttcaaatttgaag
acgtctgttattgattacaacgttcgtactgaaattttgtcgacgggaatgggcattgac
aactctgagcatgtggaacagctcaggactttacacgaaggagctaaaatgctacatggt
gcagaaagcctgagccaggccctcgcgccttctccagtggaagatgctgcttgtctgcag
agcccacggccacaggacagcggctcggaaagaggtgtggactccgagacaaagccagaa
aaccaaaagcatgaaactttatctgaaaacccgagtgattcttcccttcacagagccaca
gagcctctgaaaagcttccacccacagataaagtggttccaaaaagatgatgtggtcgta
ctgaagataagaataaggaacgtaaaagattacaaatgtaaatatttccaagatagagtc
attttcagtggctgggtgggagagaagttttacttggctgatatggagctgcaggccaac
atcgtaaaagacgcctgcaaatgcacgatcatgaacgaggaacctgtaatcactcttgca
aaagagaccaggggatcttggtgcagcttactcaaacagaggaatcctaatgtggctttt
gatttcgatcactgggaagaaaaggaagaggacagccggttcccccaggttgcgaattcc
acaaaccggcagtgcaaagtggcagagctggctgagagcagtgacgggccgtcggacgac
gacggaagtgagagtgaatga
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