Ailuropoda melanoleuca (giant panda): 109489073
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Entry
109489073 CDS
T01329
Name
(RefSeq) protocadherin alpha-C2
KO
K16493
protocadherin alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
109489073
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
109489073
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
109489073
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
109489073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
109489073
NCBI-ProteinID:
XP_034512025
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All DBs
Position
3:28828193..28831348
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AA seq
858 aa
AA seq
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MELAGTRPGATAHPRLPPPMSWVLLLPPPLLLLLLLLPGPAASQLRYSVPEEQAPGALVG
NVANALGLELRRLGPGCLRINHLGAPSPRYLELDLTSGALFVNERIDREALCEQRPRCLL
SLEVLAHSPVAVSAVEVEVLDINDNSPRFPRPDYQLQVSESVAPGARFHIESAQDPDVGA
NSVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAVLHHLVLTAVDGGSPARSG
TAQISVRVLDTNDNSPTFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSSY
TSDRERQLFSIDASTGEVRVSGALDYEEASSYQIYVQATDQGPVPMVGHCKVLVDIVDVN
DNAPEVVLTDLYSPVPEDAAPNTVVAVLSVNDQDSGLNRKVSLGLEASLPFRLNGFGNSY
TLVVSGPLDRERVAAYNITVTATDGGVPQLTSQRTLQVEISDINDNPPSFLQDSYSIYIE
ENNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSVNSASGSLYAVNSFDY
EKFREFFVTVEAQDKGRPPLSSTVTANVYVVDMNDHAPHILYPTSTNSSAAIEMVPRTAP
AGYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGTTFNLT
VVVRDNGEPSLSSSVAITVAVVDRVSKILPDTQRHVKSPRTYSEITLYLIIALSTVSFIF
LLTILVLSIVKCYRYTAYGTACCGGFCGVRERCPAELNKQANNNIEARIPHGLKVQPHFI
EVRGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGLGPGGAQAAASDSRHLTGQSGQS
AGNLIILKNDAVSQNEVR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagctggcgggcaccagacctggggcgacagcgcatccgcgactcccgccgcccatg
tcctgggtgctgctgctgccgccgcctctcctgctgctgctgctgctgctgccgggcccc
gcggcctcccagctgcgatactcggtgccggaggagcaggcacccggcgcgcttgtgggc
aacgtggctaacgcgctggggctcgagctgcgacgcctggggccgggctgcctgcgcatc
aaccatctgggtgcgcccagtccgcgctacctggagctggacctgacgagcggagcgctc
ttcgtcaacgagcgcattgaccgggaggcgctgtgtgagcagcggcctcgctgcctgctc
agcttggaagtgctggcgcacagccccgtggcggtgagcgccgtggaggtggaggtactg
gacatcaacgacaactcgccgcgcttcccgcggcccgactaccagctgcaggtaagcgaa
tcggtggcccctggagcgcgctttcacatagagagcgcgcaggaccccgacgtgggcgcc
aactccgtgcagacctacgagctcagccccagcgagcacttcgagttggaccttaaaccc
ctgcaggagaacagtaaggtgctggagctggtgctgcggaagggcctagaccgggagcag
gcagtcttgcaccacctggtcctcacagctgtggacgggggcagtccagcccgctcgggc
acggcacagatctccgtgcgtgtcctggatactaacgacaattctcccaccttcgaccag
tccacttaccgcgtccagctccgggaggacgctcccccaggcacactggtggtgaagctg
aatgcctcggacccggatgagggctctaatggcgagctcaggtactccttgagcagctac
acgtcggaccgggagaggcagctcttcagcatcgacgccagcactggggaagtgcgggta
agtggagccctggattatgaggaggcctcttcctaccagatctatgtgcaggcgactgac
cagggtccagtgcccatggtgggtcactgcaaggtgttggtggacatcgtggatgtgaat
gataatgcgccagaggtggtgctcacggacctgtacagccctgtgcctgaggatgctgcg
cccaacaccgttgtggccgtcctcagtgtcaatgaccaggactcaggcctcaaccggaag
gtgagcctgggcctggaggcctcactgcccttccgactcaatggctttgggaactcctac
accctggtggtgagcggtccattggacagggagcgggtggctgcctacaacatcacggtg
acagccactgatgggggagtaccacagctcacatcccagcggaccctgcaggtcgagatc
tctgacatcaatgacaacccaccaagcttcctacaggactcctactccatctacatcgag
gagaacaatttgccaggggtgttgctttgcactgtgcaagccacagacccggatgaaaag
gagaacgcggaggtgacctactccctcctggagagggagattcaagggctaccagtcacc
tcctatgtctccgttaacagtgccagtggcagcctttatgccgtcaactcctttgactat
gagaagtttcgggagttctttgtgactgtggaggcccaggacaaggggaggccaccactg
agcagcactgtgaccgccaatgtgtatgtggtggacatgaatgaccatgcccctcacatc
ctgtaccctacctcaaccaattcgtcagcagccattgagatggtgcctcgaactgcccct
gctggttatctggtcaccaaagtcatagccatggactcagactctggccaaaatgcttgg
ctcttttaccatctggcccagacttctgacctggacctctttaaagtagagctacacacg
ggagaaattaggactaccaggaagatgggagatgagagtggaactaccttcaacctgacg
gtggtggtccgggacaacggggagccgtcactatcatcctccgtggccattaccgtggct
gtggtggatagagtctccaaaatcctccctgatacccagagacatgttaagagtcctcgg
acatactccgagattacactttatctaataatagcattaagcacagtgtcttttatattt
cttttgacaatccttgttttgagcatcgtcaagtgctaccgctacacggcgtatggaact
gcgtgctgcgggggcttctgtggagtgagggagcggtgccccgctgagctaaacaaacag
gccaataacaatatcgaggccaggataccacatggcctcaaagtgcagcctcacttcatt
gaagtgcgagggaatggctccctcaccaagacctactgctacaaggcctgtctgacagca
ggctcagggagtgacactttcatgttttataacacaggggcacagacaggactggggcct
gggggagcccaagcagcagctagtgacagcaggcacctcacaggccaaagtgggcagagt
gcggggaacctgattattctcaaaaatgatgctgtttctcaaaacgaggtgagatag
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