KEGG   Ailuropoda melanoleuca (giant panda): 109489073
Entry
109489073         CDS       T01329                                 
Name
(RefSeq) protocadherin alpha-C2
  KO
K16493  protocadherin alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    109489073
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    109489073
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    109489073
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   109489073
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_3 SGBP_BT4661-like
Other DBs
NCBI-GeneID: 109489073
NCBI-ProteinID: XP_034512025
LinkDB
Position
3:28828193..28831348
AA seq 858 aa
MELAGTRPGATAHPRLPPPMSWVLLLPPPLLLLLLLLPGPAASQLRYSVPEEQAPGALVG
NVANALGLELRRLGPGCLRINHLGAPSPRYLELDLTSGALFVNERIDREALCEQRPRCLL
SLEVLAHSPVAVSAVEVEVLDINDNSPRFPRPDYQLQVSESVAPGARFHIESAQDPDVGA
NSVQTYELSPSEHFELDLKPLQENSKVLELVLRKGLDREQAVLHHLVLTAVDGGSPARSG
TAQISVRVLDTNDNSPTFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSSY
TSDRERQLFSIDASTGEVRVSGALDYEEASSYQIYVQATDQGPVPMVGHCKVLVDIVDVN
DNAPEVVLTDLYSPVPEDAAPNTVVAVLSVNDQDSGLNRKVSLGLEASLPFRLNGFGNSY
TLVVSGPLDRERVAAYNITVTATDGGVPQLTSQRTLQVEISDINDNPPSFLQDSYSIYIE
ENNLPGVLLCTVQATDPDEKENAEVTYSLLEREIQGLPVTSYVSVNSASGSLYAVNSFDY
EKFREFFVTVEAQDKGRPPLSSTVTANVYVVDMNDHAPHILYPTSTNSSAAIEMVPRTAP
AGYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGTTFNLT
VVVRDNGEPSLSSSVAITVAVVDRVSKILPDTQRHVKSPRTYSEITLYLIIALSTVSFIF
LLTILVLSIVKCYRYTAYGTACCGGFCGVRERCPAELNKQANNNIEARIPHGLKVQPHFI
EVRGNGSLTKTYCYKACLTAGSGSDTFMFYNTGAQTGLGPGGAQAAASDSRHLTGQSGQS
AGNLIILKNDAVSQNEVR
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggagctggcgggcaccagacctggggcgacagcgcatccgcgactcccgccgcccatg
tcctgggtgctgctgctgccgccgcctctcctgctgctgctgctgctgctgccgggcccc
gcggcctcccagctgcgatactcggtgccggaggagcaggcacccggcgcgcttgtgggc
aacgtggctaacgcgctggggctcgagctgcgacgcctggggccgggctgcctgcgcatc
aaccatctgggtgcgcccagtccgcgctacctggagctggacctgacgagcggagcgctc
ttcgtcaacgagcgcattgaccgggaggcgctgtgtgagcagcggcctcgctgcctgctc
agcttggaagtgctggcgcacagccccgtggcggtgagcgccgtggaggtggaggtactg
gacatcaacgacaactcgccgcgcttcccgcggcccgactaccagctgcaggtaagcgaa
tcggtggcccctggagcgcgctttcacatagagagcgcgcaggaccccgacgtgggcgcc
aactccgtgcagacctacgagctcagccccagcgagcacttcgagttggaccttaaaccc
ctgcaggagaacagtaaggtgctggagctggtgctgcggaagggcctagaccgggagcag
gcagtcttgcaccacctggtcctcacagctgtggacgggggcagtccagcccgctcgggc
acggcacagatctccgtgcgtgtcctggatactaacgacaattctcccaccttcgaccag
tccacttaccgcgtccagctccgggaggacgctcccccaggcacactggtggtgaagctg
aatgcctcggacccggatgagggctctaatggcgagctcaggtactccttgagcagctac
acgtcggaccgggagaggcagctcttcagcatcgacgccagcactggggaagtgcgggta
agtggagccctggattatgaggaggcctcttcctaccagatctatgtgcaggcgactgac
cagggtccagtgcccatggtgggtcactgcaaggtgttggtggacatcgtggatgtgaat
gataatgcgccagaggtggtgctcacggacctgtacagccctgtgcctgaggatgctgcg
cccaacaccgttgtggccgtcctcagtgtcaatgaccaggactcaggcctcaaccggaag
gtgagcctgggcctggaggcctcactgcccttccgactcaatggctttgggaactcctac
accctggtggtgagcggtccattggacagggagcgggtggctgcctacaacatcacggtg
acagccactgatgggggagtaccacagctcacatcccagcggaccctgcaggtcgagatc
tctgacatcaatgacaacccaccaagcttcctacaggactcctactccatctacatcgag
gagaacaatttgccaggggtgttgctttgcactgtgcaagccacagacccggatgaaaag
gagaacgcggaggtgacctactccctcctggagagggagattcaagggctaccagtcacc
tcctatgtctccgttaacagtgccagtggcagcctttatgccgtcaactcctttgactat
gagaagtttcgggagttctttgtgactgtggaggcccaggacaaggggaggccaccactg
agcagcactgtgaccgccaatgtgtatgtggtggacatgaatgaccatgcccctcacatc
ctgtaccctacctcaaccaattcgtcagcagccattgagatggtgcctcgaactgcccct
gctggttatctggtcaccaaagtcatagccatggactcagactctggccaaaatgcttgg
ctcttttaccatctggcccagacttctgacctggacctctttaaagtagagctacacacg
ggagaaattaggactaccaggaagatgggagatgagagtggaactaccttcaacctgacg
gtggtggtccgggacaacggggagccgtcactatcatcctccgtggccattaccgtggct
gtggtggatagagtctccaaaatcctccctgatacccagagacatgttaagagtcctcgg
acatactccgagattacactttatctaataatagcattaagcacagtgtcttttatattt
cttttgacaatccttgttttgagcatcgtcaagtgctaccgctacacggcgtatggaact
gcgtgctgcgggggcttctgtggagtgagggagcggtgccccgctgagctaaacaaacag
gccaataacaatatcgaggccaggataccacatggcctcaaagtgcagcctcacttcatt
gaagtgcgagggaatggctccctcaccaagacctactgctacaaggcctgtctgacagca
ggctcagggagtgacactttcatgttttataacacaggggcacagacaggactggggcct
gggggagcccaagcagcagctagtgacagcaggcacctcacaggccaaagtgggcagagt
gcggggaacctgattattctcaaaaatgatgctgtttctcaaaacgaggtgagatag

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