KEGG   Ailuropoda melanoleuca (giant panda): 109489089
Entry
109489089         CDS       T01329                                 
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
  KO
K16494  protocadherin beta
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    109489089 (PCDHB1)
Cell adhesion molecules [BR:aml04515]
 Cadherins
  Protocadherins
   109489089 (PCDHB1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Cadherin_4 Ly49
Other DBs
NCBI-GeneID: 109489089
NCBI-ProteinID: XP_019651613
Ensembl: ENSAMEG00000020138
UniProt: G1MP90
LinkDB
Position
3:28906447..28910386
AA seq 818 aa
MAVAHRKLLRSRQVGSLLFLLCISVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLAEPLQSFRVE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSHGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAYIRVKVLDVNDHVP
LFSRLVYRAQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPEAVLQTFQIDSQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDVRVGGKITCFLREDLPFAVRPTFQNSYSLVTDRGLDREEVSGYNI
TVVAMDTGPPSLFTETVIEVLISDINDNPPIFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPQSGDLSVFAYISINSDNGKLYALRTMDYEAIQNFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSADAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPVIQKLTILVQDHGQPALSTTASLN
ILLVDGFSEPYLQFRDPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVIHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQGGANGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGEAKTEAGSSLPPDSDRNRSRGSEDHGRVPDNCM
NT seq 2457 nt   +upstreamnt  +downstreamnt
atggcggtggcgcacagaaaactcctgcggagcaggcaagtagggtctcttctctttttg
ctgtgcatatctgtggggagtgcggccaccatccgctattcagtggcggaagagatggag
agcggttcgtttgtggctaatgtggctaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcggctggtttccgaaggcaacaaactgcatttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcactgtgcggcaaagctgac
ccgtgtgttctgcactttgaaatagtcctggctgagccgctgcagtcctttcgtgtggag
gtcagggtatttgatatcaatgacaatgccccggttttcctgaacaaggagccgctttta
aagattccggagagcacacctctgggttcacgttttcctctgcagagcgcccaggacctg
gacgtgggcctcaatggtcttcaaaactacaccttgagccccaacgcgtatttccacctg
catacccgctttcgcagccatgggcccaaatatgccgagctggtcctggataagcccctg
gacagagaggagcagcctgaggtcaacctgacaattacggcggtggacggcgggtcccca
cccaagtctggcatcgcctacatccgcgtgaaggttctggacgtcaatgaccacgtgccc
ctgttctctaggctggtgtaccgcgctcaggtaccagaaaatagcgccaatggttcgttg
gtggccactgtgagtgccacagacctggacgagggctccaacaaggaaattacttactcc
ttagctcaaaacccagaagcagttctccagacatttcagattgactctcaaactggagag
gttcgactgagagggcccctagattttgaagcaattgaaacatacgatattgacattcaa
gccaccgacggaggaggcctctctgcccacagcaaagtcctggtggaagtggtggatgtt
aatgacaatcctcctgaggtgacagtctcctctgtgtccagccctctccctgaggactcc
ccactacaaactgtcgtggcccttttctctattcgagaccgggacgttcgggtgggagga
aaaatcacctgcttcctcagagaagaccttccttttgcagtcagacccactttccagaat
tcttactcactggttactgacagaggcttggatcgggaagaagtttcaggctataatatc
accgtcgttgccatggatactgggccacccagtctgttcacagaaactgtgattgaggtg
ctaatatctgacattaatgacaatcccccaatatttcaggaagactcctacattttgact
gttcgagaaaacaacagcccagcaatttttattggcaaagttcacgctgaggatctagat
ttgggtgagaatgcccaagttacatatactctgctgcctccacagagtggagatttatcc
gtctttgcttacatctccataaattcagacaacgggaagctctatgcactgagaaccatg
gattatgaggccattcaaaattttcagtttgtggtaaaggcaactgatgggggcttcctg
tcactgagtagccaggttactgtcagagtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcaccttgccctgcaatgacctggtgcccaggtct
gcagatgcaggctacctggtgaccaaggtagtggctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggggaaatccgcacattgcggcagatatctgagagagaccccgtgattcagaaa
ctgaccattcttgttcaggatcatggccaaccggctctatccactactgcctcactcaac
atcttgctggtagatggtttttctgaaccctatctgcagttccgggatccttccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctggctgtgctttctttt
ctctttctcctgtctgtcacagtgatctttgttatacatatctaccagaaggttaaatat
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaacaacctg
gtacaaggtggggccaacggatcgttatctcagccgtgtccctatgaaatgtgctcagcc
actggcaccagcaatagtgagtttcggtttcttaagcgctttatgcccaacttccccttc
ccccatggcactggagaggcaaaaacagaggctggctccagtctaccaccagattctgat
aggaataggtctcgggggtcagaggaccatggccgagtacctgacaactgtatgtag

DBGET integrated database retrieval system