Ailuropoda melanoleuca (giant panda): 117794992
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Entry
117794992 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-13-like
KO
K16493
protocadherin alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
117794992
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
117794992
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
117794992
Cell adhesion molecules [BR:
aml04515
]
Cadherins
Protocadherins
117794992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117794992
NCBI-ProteinID:
XP_019651139
Ensembl:
ENSAMEG00000010731
LinkDB
All DBs
Position
3:28768563..28875439
Genome browser
AA seq
952 aa
AA seq
DB search
MLFSWRGGPGAPSLLLSLLLLTVWEPGSGQVHYSVLEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKGHGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVDRPLQVFHAE
VEVKDINDNPPVFPESKRRIVIAESRPPETRFPLDGASDADIGVNSALTYRIDPNEYFVL
DTRNNREQTSSLSLVLRKSLDREQIQEHSLLLTANDGGKPELTGTVQLLITILDVNDNAP
EFDQYIYKVTVLENAFNGTLVIKLNATDLDDGTNGDIIYSFRRPVSPAVLHAFIINPNNG
EIRTRGKLDFEEKKLYEISVEAIDKGNIPMAGHCTILVEILDINDNTPEITITSLSLPVR
EDAQVGTVIALISVSDRDSGANGQVTCSLIPHVPFKLVSTFKNYYSLVLDSALDRESVEN
YVLVVTARDRGSPSLSATASVSVEVADVNDNAPAFAQPEYXVFVKENNPPGCHIFTVSAR
DADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
GVPPLGSNVTLQVFVLDENDNAPALLPLRPGAGGAGGALSELVSRSVGAGHVVAKVRAVD
ADSGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRSLDEADLARQRLLVLVKDHGEPA
LTATATVLLSLVESGQAPKASSRVLAGAAGAEAALVDVNVYLIIAICAVSSLLVLTLLLY
TALRCSAPPTEGACGPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLPP
CLSSTEGTSEREPDSEHLKEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQ
WPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIIS
IRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctcctggcgaggaggcccaggagccccgagtctgctgctgtcgcttctgctc
ctcacagtctgggagcctgggagcggccaggtccactactcggtcctggaggaggccaaa
cacggcaccttcgtcggccgcatcgcccaggacctggggctggagctggcggagctggtg
ccgcgcttgttccgggtggcgtccaaaggccacggggatcttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagtctg
gagtgcagcatccacctggaggtgatcgtggacaggccgctgcaggttttccatgcggag
gtggaggtgaaggacattaacgacaacccgcctgtgttccctgaaagtaagagaagaata
gtaattgcagaatctagacccccagaaactcggtttccactagatggcgcatccgatgca
gatattggagtaaactcggccttgacctaccgaatcgatcccaacgagtatttcgttttg
gacacacgaaacaatcgtgaacaaacgtcttcgttgtcacttgtattgagaaaatcattg
gacagagagcaaattcaggagcatagcttattgttgacagccaatgatgggggtaaacct
gagctgaccggcacagttcagttgctgattacaattctggatgtgaatgacaatgcccca
gaatttgaccagtatatttataaggtgacagtgttagagaacgcatttaatggaacatta
gtgatcaagctaaatgccacagatcttgatgatggtacgaatggagacataatctactca
tttagaaggcccgtatcgcctgcggtgttacatgcatttatcataaatcccaacaatgga
gaaattagaaccagaggtaaactagatttcgaagaaaagaagttgtatgaaatatcggtg
gaggcaatagacaaggggaatattccaatggcaggtcattgtaccattttggtggaaata
ctagatataaatgataataccccggaaattaccatcacttctctgtcactcccggtgcga
gaggatgctcaggtgggcacggtcatcgccttgatcagcgtgtccgaccgtgactctggc
gccaacgggcaggtgacctgctcactcataccccatgtccccttcaagctggtgtccacc
ttcaagaattactattcgctggtgctggacagcgccctggacagagagagcgtggagaac
tacgttctagtagtgaccgcgcgggacagaggctcgccttcgctctccgccacggccagc
gtgtccgtggaagtggccgacgtgaacgacaacgcgccggcattcgcgcagcccgagtac
nnggtgttcgtgaaggagaacaacccgcccggctgccacatcttcacggtgtctgcgcgc
gacgccgacgcgcaggagaacgcgctggtgtcctactcgctggtggagcggcgcgtgggc
gagcgcgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaggtgtacgcgctg
cagccgctggaccacgaggagctggagctgctgcagttccaagtgagcgcgcgcgacgcg
ggcgtgcctccgctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgac
aacgcgcccgcgctgctgccgctgcggcctggggcgggcggcgcgggcggcgcgctgagc
gagctggtgtcgcggtcggtgggcgcgggccacgtggtggcgaaggtgcgcgcggtggac
gcggactctggctacaacgcgtggctgtcgtatgagctgcagccggcggcggggggcgcg
cgcagcccgttccgcgtggcgctgtacacgggcgagatcagcacgacgcgcagcctggac
gaggcggacttggcgcgccagcgcctgctggtgctggtgaaggaccacggcgagccggcg
ctgacggccacggccaccgtgctgctgtcgctggtggagagcggccaggcgccaaaggcg
tcgtcgcgggtgttggcgggcgcggcgggcgcggaggcggcgctggtggatgtcaacgtg
tacctgatcatcgccatctgcgccgtgtccagcctgttggtgctgacgctgctgctgtac
acggcgctgcggtgctcggcgccgcccacggagggcgcgtgcgggcctgggaagcccacg
ctcgtgtgctccagcgcggtggggagctggtcgtactcgcagcagaggcggcagagggtg
tgctctggggagggcccgcccaagaccgacctcatggccttcagccccagcctacctccg
tgtctgagttctacggagggaacaagtgaaagagaaccagactcagaacatttgaaagag
ccacgacagcccaaccctgactggcgttactctgcctccctccgagcaggaatgcacagc
tctgtgcacctagaggaggctggcattctgcgggctggtccaggagggcctgatcagcag
tggccaacagtatccagtgcgacaccagaaccggaggcaggagaggtgtcccctccagtc
ggtgctggtgtcaacagcaacagctggacctttaaatacggaccaggcaaccccaaacaa
tctggtcccggtgagttgccagacaaattcattatcccaggatctcctgctatcatctcc
atccggcaggagcctactaacagccaaattgacaaaagtgacttcataaccttcggcaaa
aaggaggagaccaagaaaaagaagaaaaagaagaagggtaacaagacccaggaaaaaaaa
gagaaagggaacagcacgactgacaacagtgaccagtga
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