Amycolatopsis mediterranei S699: AMES_0284
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Entry
AMES_0284 CDS
T02190
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
amm
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amm03021
]
AMES_0284 (sigB)
Transcription machinery [BR:
amm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMES_0284 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_3
HTH_24
LacI
HTH_Crp_2
HTH_IclR
HTH_31
MarR_2
HTH_7
HTH_AsnC-type
HTH_28
HTH_38
HTH_37
HTH_26
CENP-B_N
DUF7343
MarR
HTH_Tnp_ISL3
KORA
GerE
DUF6362
Motif
Other DBs
NCBI-ProteinID:
AFO73820
UniProt:
A0A9R0NQK0
LinkDB
All DBs
Position
complement(304660..305439)
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AA seq
259 aa
AA seq
DB search
MSDPAGSSGNDLDVGALFTRLAALPADSPERERIRDTLVRTHLELARNLARKFRNRDEAM
EDLVQIATVGLIHAVDRFDPAQGTDFLAFAVPTISGELRHHFRDNSWSVRVPRRLKELNA
NISAAREELTVQLSRAPKPSEIAARLGVPIEDVYEGLRAGQGRYGASLDHLLENAAHTRF
GAPDAELGQAELREALRPMLESLPERERKIVALRFGSGMSQSDIARRVGVSQMQVSRLLA
ATLKKLRSGLDESELADGT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcccgccgggagcagcgggaacgacctcgacgtcggcgcgctgttcacccgt
ctcgctgccctgccggcggactcgccggagcgcgaacgcatccgcgacaccctcgtgcgc
acgcacctggagctggcgcggaacctggcccggaagttccgcaaccgcgacgaggcgatg
gaggacctggtccagatcgccacggtcgggctcatccacgccgtcgaccggttcgacccc
gcgcaggggacggacttcctggcgttcgccgtgcccaccatctccggcgagctgcggcac
cacttccgggacaacagctggtcggtgcgggtgccgcggcggctcaaggagctgaacgcg
aacatctcggccgcgcgcgaagagctcaccgtgcagctctcgcgtgccccgaagccgagt
gagatcgccgcgcggctcggggtgcccatcgaagacgtctacgagggcctccgcgccggt
caaggccgctacggcgcctcgctggaccacctgctggagaacgctgcgcacacccgcttc
ggggcgccggacgccgagctcggccaggcggagctgcgcgaggcgctgcgcccgatgctg
gagagcctgccggagcgggagcgcaagatcgtcgcgctgcggttcggctcggggatgagc
cagtcggacatcgcccgccgtgtcggggtgtcccagatgcaggtgtcgcggctgctggcc
gcgacgctgaagaaactgcggtccggcttggacgaatccgagctggccgacggcacctga
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