KEGG   Amycolatopsis mediterranei S699: AMES_0617
Entry
AMES_0617         CDS       T02190                                 
Symbol
rifC
Name
(GenBank) rifamycin polyketide synthase
  KO
K15672  rifamycin polyketide synthase modules 7 and 8
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm01051  Biosynthesis of ansamycins
amm01052  Type I polyketide structures
Brite
KEGG Orthology (KO) [BR:amm00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   01052 Type I polyketide structures
    AMES_0617 (rifC)
   01051 Biosynthesis of ansamycins
    AMES_0617 (rifC)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01008 Polyketide biosynthesis proteins [BR:amm01008]
    AMES_0617 (rifC)
Polyketide biosynthesis proteins [BR:amm01008]
 Polyketide synthase (PKS)
  Modular type I PKS
   cis-AT PKS
    Rifamycin PKS
     AMES_0617 (rifC)
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 KR Ketoacyl-synt_C PKS_DH_N PS-DH SpnB_Rossmann PP-binding KAsynt_C_assoc Thiolase_N Sacchrp_dh_NADP Docking Epimerase RhiE-like_linker adh_short ACP_syn_III RmlD_sub_bind Polysacc_synt_2 CurL-like_PKS_C GDP_Man_Dehyd
Other DBs
NCBI-ProteinID: AFO74153
UniProt: A0A9R0NR65
LinkDB
Position
667517..672808
AA seq 1763 aa
MVSASYEKVVEALRKSLEEVGTLKKRNRQLADAAGEPIAIVGMACRLPGGVTGPGDLWRL
VAEGGDAVSGFPTDRCWDLDTLFDPDPDHAGTSYTDQGGFLHDAALFDPGFFGISPREAL
AMDPQQRLLLEASWEALEGVGLDPASLQGTDVGVFTGAGGSGYGGGLTGPEMQSFAGTGL
ASSVASGRVSYVFGFEGPAVTIDTACSSSLVAMHLAAQALRQGDCSMALAGGAMVMSGPD
SFVVFSRQRGLATDGRCKAFASGADGMVLAEGISVVVLERLSVARERGHRVLAVLRGSAV
NQDGASNGLTAPNGPSQQRVIRAALANAGIGPSDVDLVEAHGTGTSLGDPIEAQALLATY
GQDRETPLWLGSLKSNIGHTQAAAGVASVIKVVQALRHGVMPPTLHVDEPSSQVDWSEGA
VELLTGSRDWPRGDRPRRAGVSSFGVSGTNVHLIIEEAPEEPAAAVPTSADVVPLVVSAR
STGSLAGQADRLTEVDVPLGHLAGALVAGRAVLEERAVVVAGSAEEARAGLGALARGEAA
PGVVTGTAGKPGKVVWVFPGQGTQWVGMGRELLDASPVFAERIKECAAALDQWTDWSLLD
VLRGDGDLDSVEVLQPACFAVMVGLAAVWESAGVRPDAVVGHSQGEIAAACVSGALTLDD
AAKVVALRSQAIAARLSGRGGMASVALSEDEANARLGLWDGRIEVAAVNGPASVVIAGDA
QALDEALEVLAGDGVRVRQVAVDYASHTRHVEDIRDTLAETLAGITAQAPDVPFRSTVTG
GWVRDADVLDGGYWYRNLRNQVRFGPAVAELLEQGHGVFVEVSAHPVLVQPISELTDAVV
TGTLRRDDGGLRRLLTSMAELFVRGVRVDWATLVPPARVDLPTYAFDHQHFWLRPAAQAD
AVSLGQAAAEHPLLGAVVRLPQSDGLVFTSRLSLRTHPWLADHTIGGVVLFPGTGLVELA
VRAGDEAGCPVLDELVTEAPLVVPGQGGVNVQVTVSGPDQNGLRTVDIHSQRDDVWTRHA
TGTVSATPASSPGFDFTAWPPPDGQRVEIGDFYADLAERGYAYGPLFQGVRAVWQRGEDV
FAEVALPEDRREDAARFGLHPALLDAALQTGTIAAAASGQPGKSVMPFSWNRLALHAVGA
AGLRVRVAPGGPDALTVEAADETGAPVLTMDSLILREVALDQLDTARAGSLYRVDWTPLP
TVDSAVPAGRAEVLEAFGEEPLDLTGRVLAALQAWLSDAAEEARLVVVTRGAVPAGDGVV
SDPAGAAVWGLVRAAQAENPDRFVLLDTDGEVPLEAVLATGEPQLALRGTTFSVPRLARV
TEPAEAPLTFRPDGTVLVSGAGTLGALAARDLVTRHGVRRLVLASRRGRAAEGIDDLVAE
LTGHGAEVTVAACDVSDRDQVAALLKEHALTAVVHTAGVFDAGVTGALTRERLAKVFAPK
VDAANHLDELTRDLDLDAFIVYSSASSIFMGAGSGGYAAANAYLDGLMAARRAAGLPGLS
LAWGPWEQLTGMADTIDDLTLARMSRREGRGGVRALGSADGMELFDAALAAGQALLVPIE
LDLREVRADAAGGGTVPHLLRGLVRAGRQAARTAATEDGGLERRLAGLTVAEQEALLLDL
VRGQVAVVLGHADSSGVRADAAFKDAGFDSLTSVELRNRLRETTGLKLPATLVFDHPNPL
ALARHLRAELAVDEASPADAVLAGLAGLEAAIAAAGAPDGDRITARLRELLKAAEAAEAR
PGTSGDLDTASDEELFALVDGLD
NT seq 5292 nt   +upstreamnt  +downstreamnt
gtggtgagtgcgtcgtatgaaaaggtcgtcgaggcgctgcggaagtcgctcgaagaggtc
ggcacgctgaagaagcggaaccggcagctcgccgacgcggccggcgagccgatcgccatc
gtcggcatggcctgccggctgcccggtggcgtcaccgggcccggtgacctctggcggctg
gtggccgagggcggcgacgccgtctcggggttccccaccgaccgctgctgggacctggac
accctgttcgacccggatcccgaccacgcggggacgtcgtacaccgaccagggcggcttc
ctccacgacgcggccctgttcgacccgggcttcttcgggatttcgccgcgcgaggcgctg
gccatggacccgcagcagcggttgctgctggaggcgtcctgggaggcgctggaaggtgtc
ggcctcgacccggcttcgttgcagggcaccgacgtcggcgtgttcaccggcgcgggcggg
tcgggctacggcggcggcctcaccgggccggagatgcagagtttcgcgggcaccgggctg
gcctcgagcgtggcttcgggccgggtgtcctacgtcttcgggttcgagggaccggcggtc
acgatcgacacggcgtgctcgtcgtcgctggtggcgatgcacctcgccgcgcaggccctg
cgccaaggcgactgctcgatggcactggccggcggcgcgatggtgatgtcgggccccgac
tccttcgtcgtcttctcccggcagcgggggctggccaccgacgggcggtgcaaggcgttc
gcgtcgggcgccgacggcatggtgctcgccgagggcatcagcgtggtcgtgctggagcgg
ctttcggtcgcgcgggaacgcgggcaccgggtgctggccgtgctgcgcggcagcgcggtg
aaccaggatggcgcgtcgaacggcctgaccgccccgaacggcccttcccagcagcgcgtg
atccgcgccgcgctggccaacgccggaatcggaccgtccgatgtggacctcgtcgaggcg
cacgggaccgggacgagcctgggtgatcccatcgaggcgcaggccttgctggcgacctac
ggccaggaccgggagacgccgttgtggctcggctcgctgaagtcgaacatcgggcacacg
caggcggccgcgggcgtggcgagcgtgatcaaggtcgtgcaggcgctgcggcacggcgtc
atgccgccgaccctgcacgtcgacgagcccagctcgcaggtcgactggtccgaaggcgcg
gtggaactgctgaccgggagccgggactggccgcgcggggaccggccgcgccgggccggg
gtgtcgtcgttcggcgtcagcgggacgaacgtgcacctgatcatcgaggaagcccccgag
gagcccgctgcggccgtgccgacgtccgcggacgtcgtgccgctggtggtttccgcacgc
agcacgggttccctggccggtcaggccgaccggctgaccgaggtggacgtccccctcgga
cacctcgccggggcgctggtggccgggcgcgcggtgctcgaggaacgcgcggtcgtggtc
gccggttcggccgaagaagcccgcgcggggctgggtgcgctggctcgcggtgaagccgcg
cccggcgtcgtgaccgggaccgcgggcaagccgggcaaggtcgtctgggtgttcccggga
caggggacgcagtgggtgggcatgggccgggagctcctcgacgcgtccccggtgttcgcc
gagcggatcaaggagtgcgcggcggcactggaccagtggaccgactggtcgctgctggac
gtcctgcgtggtgacggtgacctggattctgtcgaggtgctgcagcccgcgtgcttcgcg
gtgatggtggggctggccgcggtctgggagtcggcgggggtccggccggacgccgtcgtc
ggccactcgcagggcgagatcgccgcggcctgcgtgtccggcgcgctcaccctcgacgac
gccgcgaaggtggtggccctgcgcagccaggcgatcgcggcgcggctgtccggccgcggc
gggatggcgtcggtcgcgttgagcgaggacgaggcgaacgcacggctgggtttgtgggac
ggccggatcgaggtggccgcggtcaacggccccgcctccgtggtgatcgcgggggacgcc
caagccctcgacgaggctttggaggtgctggccggggacggcgtccgcgtccggcaggtc
gcggtcgactacgcctcccacacccggcacgtcgaggacatccgcgacaccctcgccgag
acgctggccgggatcaccgcgcaggccccggacgtgccgttccgctccaccgtcaccggc
ggctgggtgcgggacgccgacgtcctggacggcgggtactggtaccgcaacctgcgcaac
caggtccggttcggcccggccgtggccgagctgctcgagcagggccacggggtgttcgtc
gaggtcagcgcccaccccgtgctggtgcagccgatcagcgagctcaccgacgcggtcgtc
accgggacgctgcggcgcgacgacggcggcctgcgccgcctgctgacgtcgatggccgag
ctgttcgtccgcggtgttcgcgtcgactgggccacgctggtgccgcccgcgcgcgtggac
ctcccgacgtacgccttcgaccaccagcacttctggctccggccggccgcgcaggcggac
gccgtctcgctcggccaggccgcggcggagcacccgctgctcggcgcggtcgtccggctg
ccgcagtcggacggcctggtcttcacctcgcggctgtcgctgcggacgcacccgtggctg
gccgaccacaccatcggcggcgtggtgctgttccccggcaccgggctggtcgaactggcc
gtgcgggccggcgacgaggccgggtgcccggtcctggacgaactcgtgaccgaggcgccg
ctggtcgtgcccgggcagggcggagtgaacgtccaggtcacggtgagcggcccggaccag
aacggcttgcgcacggtggacatccactcccagcgcgacgacgtgtggacccggcacgcg
accggaacggtctcggcgaccccggcgagcagccccggcttcgacttcaccgcgtggccg
ccgccggacgggcagcgcgtcgagatcggcgacttctacgccgacctcgccgagcgcggg
tacgcgtacgggcccttgttccagggcgtgcgggcggtgtggcagcgcggcgaagacgtg
ttcgccgaggtcgcgctgcccgaagaccggcgggaggacgccgcccggttcggcctgcac
ccggcgttgctggacgcggccctgcagaccgggacgatcgccgcggccgcgtccggtcag
ccgggcaagtccgtgatgccgttctcgtggaaccggctggcgctgcacgccgtcggggcc
gcgggcctccgggtccgcgtggcccccggcggaccggacgcgctgaccgtcgaggccgcc
gacgagaccggcgccccggtcctcaccatggactcgctgatcctgcgtgaagtcgccctc
gaccagctggacactgcgcgcgccggctcgctctaccgggtggactggacgccactgccc
actgtggacagtgcggtgcccgctggtcgggccgaggtgctggaagctttcggcgaggag
cccctggacctgaccggccgggtgctggccgccctgcaggcgtggctttccgacgcggcg
gaggaagcccgcctggtcgtggtgacccggggtgcggtgcccgccggagacggtgtggtg
agcgatccggcgggtgccgcggtgtggggcctggtccgggccgcgcaggcggagaacccg
gaccggttcgtcctgctcgacaccgacggcgaggtgccgctggaagcggtgctggcgacc
ggtgagccgcagctcgcgctgcgcggcacgacgttctcggtgccccggctcgcccgcgtc
accgaaccggcggaagccccgctgacgttccgtccggacgggacggtcctggtctccggc
gccgggacgctgggtgcgctcgccgcccgcgacctcgtcacccggcacggcgtccggcgg
ctcgtgctggccagccggcgcggccgggccgccgagggcatcgacgacctcgtcgccgag
ctgaccgggcacggcgccgaagtgacggtcgccgcctgcgacgtctccgaccgcgaccag
gtggcggcgctgctcaaggaacacgcgctgaccgcggtggtgcacacggcgggcgtgttc
gacgccggtgtcaccggcgcgctgacccgggagcggctggccaaggtgttcgcgcccaag
gtcgacgcggccaaccacctcgacgagctgacccgcgacctggacctcgacgcgttcatc
gtctactcgtccgcctcctcgatcttcatgggcgcgggcagcggcgggtacgcggcggcg
aacgcctacctcgacggcctgatggccgcccggcgcgcggcgggcctgccggggctgtcg
ctggcctggggcccgtgggagcagctcaccggcatggccgacaccatcgacgacctcacc
ctggcccggatgagccggcgcgaaggccgcggcggcgtccgcgcgctcggctccgccgac
ggcatggagctgttcgacgccgcgctcgcggccgggcaggcgctgctggtgccgatcgag
ctcgacctgcgcgaggtgcgggccgacgcggccggcggcggcacggtgccgcacctgctg
cgcgggctggtccgcgcgggccggcaggcggcgcggacggcggccaccgaggacggcggc
ctggaacgccggctggccgggctcaccgtggccgaacaggaagcgctgctgctcgacctc
gtccgcggtcaggtcgccgtcgtgctcgggcacgccgacagctccggcgtccgcgccgac
gcggcgttcaaggacgccgggttcgactcgctgacgtcggtggagctgcgcaaccggctg
cgcgagacgaccggcctgaaactgcccgcgacgctggtcttcgaccatccgaacccgctg
gcactggcccggcacctgcgggcggaactcgccgtcgacgaggcatccccggccgatgcg
gtgctggccgggctcgccgggctggaggcggccatcgcggccgccggcgccccggacggc
gaccggatcaccgcgcggctgcgggaactgctcaaggccgccgaggcggccgaggcccgg
ccgggcacctccggcgatctcgacacggccagcgacgaggaactgttcgccctcgtcgac
gggctcgactga

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