Amycolatopsis mediterranei S699: AMES_0984
Help
Entry
AMES_0984 CDS
T02190
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor
Organism
amm
Amycolatopsis mediterranei S699
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
DUF11
Motif
Other DBs
NCBI-ProteinID:
AFO74520
LinkDB
All DBs
Position
complement(1051941..1054172)
Genome browser
AA seq
743 aa
AA seq
DB search
MSTVPADLSGKSDSELIAEVRSGKIASYGTLYERHTGAARNLARQLARSSSEADDLVSEA
FAKVLDTLRGGKGPDTAFRAYLLTALRHTAYDRTRKERRVDLNEDMTEVGGAAAEALTVP
FSDTAVAGLERTMAAKAFARLPERWQAVLWHTEIEQQSPAEVAPLLGLTANGVSALAYRA
REGLRQAYLQVHLQENAGERCRACAERLGAWTRDGLSKRERAQVESHLDECDRCRALAAE
LADVNGGLRAIIAPIVLGGAALGYLATIGAAKASAATAATAGAAAAGAAAAGGKAGAGAA
AAGPRQFAGVAAAGTAIVAAVVIALTAGGGTQEVPVAAPVPPPAQQVAPPAPQPPPPAPP
APQQPAPPVPQPPVPQPPAPPAAPSVAPAPPPVAPPAPAPPPAPAPPVPAPPSMSATTPP
GGVELSPGAASNLPITVRNDGGSVSEPVAVALKLPPGVRAVDTGGGGAPQARAEDPTPIS
VNCPGGQGTVVCKTGAGLQPGQSATLNFRLQADEDAEGGTVTGSVTAGVQISVHVSVKVT
VKLPPDAVVLEAQGDGLSAFPWNHHPLVYVRVRNTGETTKPVTVTFDTPLKQWWSLRGFP
CTTTDESASCTTKSAVAPGQHVNLWVRLLGRPNDGRVTINAQLGRATAPPVTVDFGCWRH
WCGKDPLPTPTTPSVPTTTPSKPKPTPSKPTPKPPVTTTDTDEPASEPPVSSTTTSAPPR
SGGNPGAKPPTVSPGKVFGWLTG
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgttcccgccgatctcagcggaaagagtgactccgagctgattgcggaagtc
cgctccgggaagatcgcgtcgtacggaacgctctacgaacgacacaccggcgcggcccgc
aatctggcccgccagctggcccgctccagctccgaagccgacgatctcgtgtccgaggcg
ttcgccaaggtgctcgacacgctccgtggcggcaagggcccggacacagccttccgggcg
tacctgctgaccgcgctgcgtcacaccgcgtacgaccggacccgcaaggagcgccgggtc
gacctcaacgaggacatgaccgaggtcggcggcgccgcggccgaggcgctgaccgtgccg
ttctccgacaccgcggtcgccgggctcgagcggacgatggccgccaaggcgttcgcgcgg
ctgcccgaacgctggcaggcggtgctctggcacaccgagatcgagcagcagagcccggcc
gaggtcgcgccgctgctgggcctgaccgcgaacggagtctccgcgctcgcctaccgcgcc
cgcgaggggctccgccaggcctatctgcaggtccacctgcaggagaacgccggggaacgc
tgccgcgcctgcgccgagcggctcggcgcgtggacccgcgacgggctgtccaaacgggaa
cgcgcccaggtcgagagccacctcgacgagtgcgaccggtgccgggcgctggccgcggag
ctggccgacgtgaacggcgggctgcgcgcgatcatcgccccgatcgtcctcggcggcgcc
gcgctgggctacctcgccaccatcggcgccgcgaaggcgagcgcggccaccgcggccacc
gcgggcgcggccgccgccggtgccgcggcggccggcggcaaggccggcgcgggggccgcc
gccgcggggccccgccagttcgccggcgtcgccgccgcgggcaccgcgatcgtcgcggcc
gtcgtcatcgcgctcaccgcgggcggcgggacgcaggaggtcccggtcgccgccccggtg
ccgccgccggcccagcaggtcgcaccgccggccccgcagccgccgcccccggccccgccc
gcgccgcagcagcccgcacccccggtaccccagcccccggtgccccagccgcccgcgccg
cccgcggccccgtcggtcgcgcccgccccgccgccggtcgcgccccccgctccggcaccg
ccgcccgccccggccccgcccgtgccggcaccgccgtcgatgtccgcgacgaccccgccg
ggtggcgtcgagctcagcccgggcgccgcgtcgaacctgccgatcaccgtgcgcaacgac
ggcgggagcgtgtccgagccggtggccgtcgcgctgaagctgccgcccggggtgcgtgcg
gtcgacaccggcggtggtggcgcgccgcaggcccgcgcggaggaccccaccccgatctcg
gtgaactgccccggcggccagggcacggtcgtctgcaagaccggcgccggcctgcaaccc
ggccagagcgcgacgctgaacttccggctgcaggccgacgaagacgccgagggtggcacg
gtgaccgggtcggtcacggccggcgtgcagatctccgtccacgtgagcgtcaaggtcacc
gtgaagctcccgccggacgccgtggtcctggaagcccagggcgacgggctgtcggcgttc
ccctggaaccaccacccgctggtctacgtccgggtccgcaacaccggcgagacgaccaag
ccggtgaccgtcaccttcgacaccccgctcaagcagtggtggagcctgcgcggctttccc
tgcacgacgaccgacgagagcgcgagctgcacgacgaagagcgcggtggcgccgggccag
cacgtcaacctgtgggtgcggctgctgggccgtcccaacgacggacgggtgacgatcaac
gcccagctcggccgggcgacggcaccgccggtgaccgtggacttcggctgctggcgccac
tggtgcggcaaggacccgctgcccacgccgacgaccccgtcggtccccacgacgacgccg
tccaagccgaagccgacgccgtcgaagcccacgccgaagccaccggtgacgacgacggac
accgacgagccggcgagcgagccgccggtttcctcgaccacgacgagcgcaccaccgcgg
tcgggcgggaacccgggggccaagccgccgacagtcagccccgggaaggttttcggctgg
ctgacggggtag
DBGET
integrated database retrieval system
