Amycolatopsis mediterranei S699: AMES_1702
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Entry
AMES_1702 CDS
T02190
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amm
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amm03400
]
AMES_1702 (sbcD)
DNA repair and recombination proteins [BR:
amm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMES_1702 (sbcD)
Archaeal homologous recombinant proteins
AMES_1702 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
AFO75238
UniProt:
A0A9R0NT94
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Position
1847257..1848417
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AA seq
386 aa
AA seq
DB search
MKFLHTSDWHIGKTLKGRNRLDEQRAVLGEIVRIARDGQFDAILVAGDLYETSAPSAAAQ
ELVVRALMALRETGAEVLAIAGNHDHAATFEAYRPLLKAAGIQLTGDPRPVHDGGVVSFD
ARSTGECVNVAVLPFLSQRYAVRAAELLAGTPADNVGEYDQRVRDILEHLKSGFTPGAVN
LVMAHLTVTGGTMGGGERAAQSIFEYHVPATAFGADPHYVALGHLHRRQSLPAACPVHYS
GSPFAVDFGEQDNTSVVLSVEVSPATPAKITDIPLAAGRKLRTVHGTVAELIARAGEFGE
DYLRVYLREATRAGLREEIQQALPNALEIRIDPEFAAPVPTSGGDRAIADRSPGELFASY
CAERTVEDKRVQALFARLHDEETSGV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcctgcacacctccgactggcacatcggcaagacgctcaaggggcgcaaccgc
ctcgacgagcagcgggccgtgctcggcgagatcgtccggatcgcgcgggacgggcagttc
gacgcgatcctcgtcgcgggtgacctctacgagacgtcggcgccgtcggcggccgcgcag
gaactcgtggtgcgggcgttgatggcgctgcgcgaaaccggtgccgaggtgctcgccatc
gccgggaaccacgaccacgccgcgacgttcgaggcgtaccggccgctgctcaaggccgcg
ggcatccagctcaccggcgatccgcggccggtccacgacggcggcgtcgtctcgttcgac
gcgcgttcgacgggcgagtgcgtcaacgtcgccgtgctgcccttcctttcccagcgctac
gcggtccgcgccgccgagctgcttgccgggaccccggcggacaacgtcggcgagtacgac
cagcgcgtgcgcgacatcctggagcacctcaagtccggattcacccccggtgcggtgaac
ctcgtcatggcgcacctgacggtgaccggcgggacgatgggcggcggggaacgcgcggcg
cagtccatcttcgagtaccacgtgcccgcgacggcgttcggcgccgacccgcactacgtg
gcgctgggccacctgcaccggcgccagtcgctgcccgccgcgtgcccggtgcactacagc
ggttcgccgttcgccgtcgacttcggcgagcaggacaacaccagcgtcgtgctgtcggtg
gaggtgagtccggccacgccggcgaagatcaccgacatcccgttggccgccgggcggaaa
ctgcggacggtccacggcacggtggcggaactgatcgcccgcgcgggggagttcggcgag
gactacctccgcgtctaccttcgcgaagcgaccagggccgggctgcgggaggagatccag
caagccctgccgaacgccctggaaatccgcatcgacccggagttcgccgcgccggtgccg
acgtcgggcggcgaccgcgcgatcgcggaccgttcgccaggagagctcttcgcgagctac
tgcgcggaacgaaccgtcgaggacaagcgcgtgcaggcgctcttcgcgcggctgcacgac
gaagagacgagcggggtgtga
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