Amycolatopsis mediterranei S699: AMES_1712
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Entry
AMES_1712 CDS
T02190
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
amm
Amycolatopsis mediterranei S699
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amm03032
]
AMES_1712 (hupB)
03036 Chromosome and associated proteins [BR:
amm03036
]
AMES_1712 (hupB)
03400 DNA repair and recombination proteins [BR:
amm03400
]
AMES_1712 (hupB)
DNA replication proteins [BR:
amm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMES_1712 (hupB)
Chromosome and associated proteins [BR:
amm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AMES_1712 (hupB)
DNA repair and recombination proteins [BR:
amm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AMES_1712 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AFO75248
UniProt:
A0A9R0NTC0
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All DBs
Position
1859972..1860757
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AA seq
261 aa
AA seq
DB search
MANKAQLIEALTERLGDKKAASEAVDGLVDIIIRTVNKGEKVNITGFGVFEKRARAARTA
RNPRTGEAVRVKKTNVPAFRAGTTFKDVISGAKKLPKATPVKRTPTATRAAATTTTRATT
PRATTSRTAAAAPKPATTRSTTTRTRATAAKPATTRTPAAKPATTRAKAAPKTTAAKTTA
AKAAPPAKAATAAKTTVAKATTAAKSAAAKAATAAKTTAAKAATAAKPTTARKTSAARTP
AAKTTAAKTPARRTSAAAKKD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaaggcccagctgatcgaggcgctgaccgagcgcctgggcgacaagaaggcc
gcttccgaggcggtcgacggtctggtcgacatcatcatccggacggtcaacaagggcgaa
aaggtcaacatcaccggcttcggggtgttcgagaagcgcgcccgtgccgcgcggacggct
cgcaacccgcgcaccggtgaggccgtccgcgtcaagaagaccaacgtgcccgccttccgc
gcggggaccacgttcaaggacgtcatttcgggagcgaagaagctgccgaaggcgaccccg
gtcaagcgcacaccgacggccacccgagcggcggcgaccacgacgacgcgcgcaaccacg
ccccgcgcaaccacgtcccgcaccgcggcggcggctccgaagccggccaccacgcggtcg
acgaccacgcgaacccgcgcaacggcggcaaagccggccacgacgaggacaccggcggcc
aagccggcaaccacccgcgccaaggcggcgccgaagacgacggcggcgaagaccacggcg
gcgaaggcggccccgcccgcaaaggcggccacggcggcgaagaccacggtggcgaaggcg
accacggctgcgaagagcgcggccgcgaaggccgctacggcggcgaagaccaccgccgcg
aaggcagccacggccgcgaagccgactacggctcgtaagacctcggcggcccggaccccg
gcggccaagaccaccgcggccaagaccccggcaaggcggacctcggccgcggcgaagaag
gactga
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