KEGG   Amycolatopsis mediterranei S699: AMES_4382
Entry
AMES_4382         CDS       T02190                                 
Symbol
pel
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm00040  Pentose and glucuronate interconversions
amm01100  Metabolic pathways
amm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    AMES_4382 (pel)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AMES_4382 (pel)
Enzymes [BR:amm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     AMES_4382 (pel)
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: AFO77918
UniProt: A0A9R0NYJ5
LinkDB
Position
4873214..4874500
AA seq 428 aa
MRWKAFAGCLALLGLTLTAAPAQAHGRDPGRVVLGAHDGWAAATTGTTGGAAAAPADVHT
VTKRSELAAALAAHPGAPKIIYVRGTIEGNVDAADRPASCESFADPAYSLPAYLAAYDPA
TWGRVPPSGPLEEARARSQANQAKQVVLDVGPNTTIVGLGGHAVLHGLTLRVTGDNVILR
NLNFADAHDCFPQWDPLDTADGNWNSEYDNLDLVGATHVWVDHNEFSDGGNDRQPSYYGR
KYEVHDGLLDIVNGSDLVTVSYNRLHDHDKTMLIGNTDKPAYDVGKLRVTLHHNLFSEIG
QRAPRVRYGQVHVYDNLYLVPDPAAYTYSIGVGVESRIYAENNFFRIPAGLPLGQLVHYW
KGTVLHATGTLVAAGNQWPRPVDLLAEYNAANDPDLGPDVGWTPSFVERLDPTWAVPALV
LAGAGPGR
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgcgctggaaagctttcgcggggtgcctcgccctgctcggtttgacgctcaccgccgca
cccgcccaggcgcacggccgcgatcccggccgggtcgtgctcggtgcgcacgacggctgg
gccgccgcgaccaccgggaccaccggcggggcagccgccgcccccgccgacgtccacacg
gtgaccaagcgctccgagctcgcggccgcactggcggcgcacccgggcgccccgaaaatc
atctacgtccgcggcaccatcgagggcaatgtggacgccgcggaccggccggcgagctgt
gaaagtttcgccgacccggcctacagcctcccggcgtacctggcggcgtacgacccggcg
acgtgggggagagtgccgccgtcggggccgctggaggaggctcgcgcgcggtcgcaggcc
aaccaggcgaagcaggtcgtgctcgacgtcggcccgaacaccacgatcgtcgggctcggc
ggccacgccgtgctgcacgggctgaccctgcgcgtcaccggggacaacgtcatcctgcgg
aacctgaacttcgccgatgcccacgactgcttcccgcagtgggatccgctcgacaccgcc
gacggcaactggaactccgagtacgacaacctcgacctggtcggcgcgacgcacgtctgg
gtggaccacaacgagttcagcgacggcgggaacgatcggcagccgtcctactacgggcgc
aagtacgaggtccacgacgggctgctcgacatcgtgaacggctcggacctggtcacggtg
tcctacaaccggctgcacgaccacgacaagaccatgctgatcggcaacaccgacaagcct
gcttacgacgtcggcaagctgcgggtcacgctgcaccacaacctgttctccgagatcggc
cagcgcgcgccccgggtgcggtacggccaggtgcacgtctacgacaacctgtacctggtg
ccggatccggccgcctacacgtattcgatcggcgtgggcgtggagtcccggatctacgcg
gagaacaacttcttccggatccccgccggactgccccttggccagctcgtgcactactgg
aagggaaccgtgctgcacgcgaccggcacgctggtggcggcgggaaaccagtggccgcgg
ccggtggacctgctggcggagtacaacgcggccaacgatccggatctcgggccggacgtc
ggctggacgccgagcttcgtcgagcgcctcgaccccacgtgggcggtcccggcgctggtg
ctcgccggtgccggacccgggcgctga

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