Amycolatopsis mediterranei S699: AMES_6227
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Entry
AMES_6227 CDS
T02190
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMES_6227 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amm03019
]
AMES_6227 (pnp)
03016 Transfer RNA biogenesis [BR:
amm03016
]
AMES_6227 (pnp)
Enzymes [BR:
amm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AMES_6227 (pnp)
Messenger RNA biogenesis [BR:
amm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMES_6227 (pnp)
Transfer RNA biogenesis [BR:
amm03016
]
Prokaryotic type
tRNA degradation factors
AMES_6227 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
S1_RRP5
DUF6703
YqzN_YkzM
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AFO79763
UniProt:
A0A9R0UBP2
LinkDB
All DBs
Position
complement(7004346..7006607)
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AA seq
753 aa
AA seq
DB search
MTDSTGVTVHETEAVIDNGRFGTRTVRFETGRLAKQAAGAVVAYLDEETMLLSATTASKH
PKDHFDFFPLTVDVEERMYAAGRIPGAFFRREGRPSTDAILTCRLIDRPLRPSFTDGLRN
EIQVVITVQSLNPDDPYDVLAINAASASTQIAGLPFSGPVGGVRVALVEDQWVAFPTWSQ
LEKATFNMVVAGRIVGDDVAIMMVEAEGTEHTLDLIAAGGKAPDEAAVAAGLEASKPFIK
VLCEAQQQLADVAAKPTGEFPVFLAYEQDVYDAVAAIATDDLARALQIPGKQDRDAATDE
VKAAVLEKIGLGEGEAFEGRDKEIGGAFKALTKKIMRQRVLTEKIRMDGRGLTDIRSLSA
EVAVIPRAHGSALFERGETQILGVTTLNMLRLEQQIDSLSPETHKRYMHHYNFPPFSTGE
TGRVGSPKRREIGHGMLAERALVPVLPKRDEFPYAIRQVSEALGSNGSTSMGSVCASTMA
LYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDILGAEDALGDMDFKVAGTKDIITAL
QLDTKLDGIPSEVLAAALKQAKDARLTILEVIAEAIDSPDEMSPYSPRVTSVKIPVDKIG
EVIGPKGKMINSITEQTGADISIEDDGTIYVGAADGPSAEAAIDLINAIANPQLPKVGER
FLGTVVKTAAFGAFVSLLPGKDGLVHISKLGNGKRIAKVEDVVNVGDKLRVEIADIDNRG
KISLIVVKDDEPAKPAEGDAPAADADAEKADAK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactccaccggagtcaccgtgcacgagaccgaagccgtgatcgacaacggccgg
ttcggcacccgcaccgtccgcttcgagacgggccgcctggccaagcaggccgccggcgcc
gtcgtcgcgtacctcgacgaagagaccatgctgctctcggcgacgaccgcgtcgaagcac
ccgaaggaccacttcgacttcttccccctgacggtggacgtcgaggagcgcatgtacgcg
gccggccgcatccccggcgccttcttccgccgcgagggccgcccgtcgaccgacgcgatc
ctgacctgccgcctgatcgaccggccgctgcgcccgtcgttcaccgacggtctccgcaac
gagatccaggtcgtcatcaccgtccagagcctcaacccggacgacccgtacgacgtgctg
gccatcaacgccgcctcggcgtcgacccagatcgccggcctgccgttctccggcccggtc
ggcggcgtgcgcgtcgcgctggtcgaggaccagtgggtcgcgttcccgacctggtcgcag
ctggagaaggcgaccttcaacatggtcgtcgccggccgcatcgtcggtgatgacgtcgcg
atcatgatggtcgaggccgagggcaccgagcacacgctcgacctgatcgccgccggcggc
aaggcgcccgacgaggccgcggtcgccgcgggcctcgaggcttcgaagccgttcatcaag
gtgctgtgcgaggcccagcagcagctggccgacgtcgccgccaagccgaccggcgagttc
ccggtcttcctggcctacgagcaggacgtctacgacgccgtcgcggcgatcgccaccgac
gacctggcccgcgcgctgcagatcccgggcaagcaggatcgcgacgccgcgaccgacgag
gtcaaggccgccgtcctggagaagatcggcctcggcgagggcgaagccttcgagggccgt
gacaaggagatcggcggggcgttcaaggccctgacgaagaagatcatgcgccagcgcgtc
ctcacggagaagatccgcatggacggccgtggcctcaccgacatccggtcgctctcggcc
gaggtcgctgtcattcctcgggcgcacggttcggcactctttgaacgtggggaaacccag
atcctgggcgtcaccacgctgaacatgctgcgcctggagcagcagatcgactcgctgtcg
cccgagacgcacaagcgctacatgcaccactacaacttcccgccgttctccaccggcgag
accgggcgcgtcggttcgccgaagcgccgcgagatcggccacggcatgctcgccgagcgc
gccctggtgccggtgctgccgaagcgggacgagttcccgtacgcgatccgccaggtctcc
gaggcgctgggctccaacggctcgacctcgatgggctcggtctgcgcgtccaccatggcg
ctgtacaacgccggtgtgccgctgaaggcgccggtcgcgggcatcgcgatgggcctggtc
tccgacgaggtcgacggcgagacgcgctacgtggcgctcaccgacatcctcggcgccgag
gacgccctgggcgacatggacttcaaggtcgccggcaccaaggacatcatcaccgcgctg
cagctggacacgaagctcgacggcatcccctccgaggtcctcgccgccgcgctgaagcag
gcgaaggacgcccggctcaccatcctggaggtcatcgccgaggcgatcgacagcccggac
gagatgagcccgtactccccgcgcgtcacctcggtgaagatcccggtcgacaagatcggc
gaggtcatcggcccgaagggcaagatgatcaactcgatcaccgagcagaccggtgccgac
atctccatcgaggacgacggcacgatctacgtgggcgcggccgacggcccgtcggcggag
gcggcgatcgacctgatcaacgccatcgccaacccgcagctgcccaaggtcggcgagcgc
ttcctcggcaccgtggtgaagacggccgcgttcggcgcgttcgtctcgctgctgccgggc
aaggacggcctggtgcacatctcgaagctgggcaacggcaagcggatcgccaaggtcgag
gacgtggtcaacgtgggcgacaagctccgcgtcgagatcgccgacatcgacaaccgcggc
aagatcagcctgatcgtggtcaaggacgacgagcccgcgaagccggccgagggtgacgcc
cccgccgccgacgccgacgccgagaaggccgacgccaagtaa
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