Amycolatopsis mediterranei S699: AMES_6279
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Entry
AMES_6279 CDS
T02190
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm00071
Fatty acid degradation
amm00310
Lysine degradation
amm00362
Benzoate degradation
amm00380
Tryptophan metabolism
amm01100
Metabolic pathways
amm01110
Biosynthesis of secondary metabolites
amm01120
Microbial metabolism in diverse environments
Module
amm_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
AMES_6279 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
AMES_6279 (gcdH)
00380 Tryptophan metabolism
AMES_6279 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMES_6279 (gcdH)
Enzymes [BR:
amm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
AMES_6279 (gcdH)
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
AFO79815
UniProt:
A0A9R0P2E4
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Position
7054594..7055790
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AA seq
398 aa
AA seq
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MTMEALEGQLTADFYNFETLLGDDERKLLVKAREFMRTDVKPLVNENWEAGTFPKELIGM
FRESGLAGLPYEGYGEHKPAVSHLLTGMMAMEMSRTDASVATFFGVHNGLAMYSIASGGS
QEQRDRWLPEMAAMDKIGAFAMTEPLGGSDVAGGMRTTAKRDGDSWILNGAKKWIGNATF
ADYVVVWARDLDDNHVKGFVVEKGTPGFVAEKIQGKTAFRIVENAEITLTDVRVPEENRL
QGINSFRDVAEILRATRGGVAWQALGVMIGAYELALDYAKERTQFGRPIARFQLVQDLLV
KSLGNITASWGMLVQLARLQDAGIFQDEHSSLAKAFVTARMREVVAWSREIFGGNGIVLE
YDVARFFADAEAIYSFEGTREMNTLIVGKAITGQSAFV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggaagcactcgaaggccagctgaccgccgacttctacaacttcgaaacgctg
ctgggcgacgacgagcgcaagctgctcgtcaaggcgcgcgagttcatgcgcaccgacgtc
aagccgctggtgaacgagaactgggaagccggcaccttcccgaaggaactgatcgggatg
ttccgggagtcgggcctggcgggcctgccctacgagggctacggcgagcacaagccggcg
gtcagccacctgctcaccggcatgatggcgatggagatgagccgcacggacgcttcggtg
gcgacgttcttcggtgtccacaacggactcgcgatgtactcgatcgcgagcggcggcagc
caggagcagcgcgaccgctggctcccggaaatggccgcgatggacaagatcggcgcgttc
gcgatgaccgaaccgctcggcggctccgacgtcgccggtggcatgcgcaccacggccaag
cgagacggtgacagctggatcctcaacggcgccaagaagtggatcggcaacgcgactttc
gccgactacgtcgtggtgtgggcccgggacctcgacgacaaccacgtcaaggggttcgtc
gtcgagaagggcacgccgggcttcgtggcggagaagatccagggcaagacggcgttccgg
atcgtcgaaaacgccgaaatcaccctgaccgacgtccgcgttccggaagagaaccgcctg
cagggcatcaactccttccgcgacgtcgccgagatcctgcgcgccacccgcggcggtgtg
gcctggcaggcgctgggcgtgatgatcggcgcctacgagctcgcgctggactacgccaag
gagcgcacgcagttcggccggccgatcgcccgcttccagctggtgcaggacctgctcgtc
aagagcctcggcaacatcaccgcctcctggggcatgctggtgcagctcgcccgcctgcag
gacgcggggatcttccaggacgagcactcctcgctggccaaggcgttcgtcaccgcgcgg
atgcgcgaggtcgtcgcctggagccgggagatcttcggcggcaacgggatcgtgctcgag
tacgacgtggcgcggttcttcgccgacgccgaggcgatctactccttcgagggcacgcgc
gagatgaacaccctgatcgtcggcaaggcgatcaccggacagagcgcgttcgtctga
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