Amycolatopsis mediterranei S699: AMES_6597
Help
Entry
AMES_6597 CDS
T02190
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMES_6597 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amm03019
]
AMES_6597 (recQ)
03400 DNA repair and recombination proteins [BR:
amm03400
]
AMES_6597 (recQ)
Enzymes [BR:
amm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMES_6597 (recQ)
Messenger RNA biogenesis [BR:
amm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMES_6597 (recQ)
DNA repair and recombination proteins [BR:
amm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMES_6597 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_30
AAA_22
Helicase_RecD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AFO80133
UniProt:
A0A9R0UC25
LinkDB
All DBs
Position
7384432..7386543
Genome browser
AA seq
703 aa
AA seq
DB search
MDTTSTTPALRDRAETLLRALAGDSAKLREDQWTAIEALVAQRRRALVVQRTGWGKSAVY
FLATALLREQGSGPTVIVSPLLALMRNQISAAARAGIHAATMNSANPQEWDQVQAAVAAG
EVDVLLVSPERLNNPDFRDNVLPKLTASTGLLVVDEAHCISDWGHDFRPDYRRLRTLLGD
LPDGVPVLATTATANDRVVTDVAEQLGLGTGADTLVLRGSLDRESLRLSVCRLPTSQARL
AWLAEHLAELPGSGIIYTLTVAAAHDVASLLKDRGYPVAAYTGKTDPADRQAAEDDLLGN
RVKALVATSALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRGVERAEVVLLPGEEDK
AIWAYFGSLAFPDELRVTQVLNTLAYADRPLSTAALEPSVELSRSRLEMVLKVLDVDGAV
RRVKGGWTSTGEEWQYDRGRYQRVAEARDREQEAMVGYLATGDCRMEYLRRQLDDPEATP
CGRCDNCTGKYWDTSVADEVVDATRERLQRPGVEVAPRKQWPTGMSSLDVPVSGRISADD
QAEPGQVLGRLTDVGWGNRLRELVGPQANDAEVPDSVFKACVQVLAGWQWAQRPVAVVAV
PSSTRPQLVYSLATRLAEIGKLDFLGALDAEGPPPRQANSAQRLADLWRRMSMPADLAAV
LPSGPVLLVDDVIDTGWTMTLAARLLRRAGAPAVLPFALASTA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgaccagcaccaccccagccctccgcgaccgtgccgagaccctcctccgggca
ttggccggcgactcggcgaagctgcgcgaagaccaatggacggccatcgaggccttggtg
gcgcagcggcgccgcgcgctggtcgtgcagcgcaccgggtggggcaagtcggcggtgtac
ttcctggccacggcgttgctgcgcgaacagggcagcgggccgacggtgatcgtctcgccg
ctgctggcgctgatgcgcaaccagatctcggcggccgcgcgagccgggatccacgcggcg
acgatgaactccgcgaatccccaggagtgggaccaggtccaagcggcggtcgcggccggc
gaggtggacgtgctgctggtgagccccgaacggctgaacaacccggacttccgcgacaac
gtgctgccgaagctgaccgcgagcaccgggctcctggtggtcgacgaggcgcattgcatt
tcggactggggccacgacttccggcccgactaccggcgcctgcgcaccctgctgggtgat
ctcccggacggcgttccggtgctggcgaccaccgcgaccgcgaacgaccgcgtggtcacc
gacgtcgccgagcagctgggcctcggcaccggcgcggacacgctggtgctgcgcggcagc
ctcgaccgggaaagcctgcggctgtcggtgtgccggctgccgacgtcgcaggcgcggctg
gcgtggctcgcggagcacctggccgagctgcccggttccgggatcatctacacgctgacc
gtcgcggcggcgcacgacgtcgcttcgctgctgaaggaccgcggctacccggtggcggcc
tacaccggcaagaccgacccggccgaccggcaggcggccgaggacgacctgctcggcaac
cgcgtcaaggccctggtcgcgacgtccgcgctgggcatgggcttcgacaagccggatctc
gggttcgtggtgcacctcggcgcgccgtcgtcgccgatcgcctactaccagcaggtcggc
cgcgccgggcgtggcgtggagcgcgccgaggtcgtgctgctgcccggcgaggaggacaag
gcgatctgggcgtacttcgggtcgctggccttccccgacgaactgcgggtgacacaggtg
ctgaacaccctcgcctacgccgaccgtccactgtcgacggccgcgctcgagccgtcggtc
gagctttcccggtcacggctggaaatggtgctcaaggtcttggacgtcgacggcgcggtc
cggcgcgtgaagggcggctggacgagcacgggcgaggaatggcaatacgaccgcgggcgg
taccagcgggtcgcggaagcgcgtgaccgcgagcaggaggcgatggtcggctacctcgcg
accggggactgccggatggaatacctgcggcgtcagctcgacgaccccgaggcgacaccg
tgcggacggtgcgacaactgcaccgggaagtactgggacacgtcggtggccgacgaggtc
gtcgacgcgacccgggaacgcctgcagcggcccggcgtcgaggtggccccgcggaagcag
tggcccaccggaatgtcctctttggacgttccggtctcgggccggatctccgccgacgac
caggccgagccgggccaggtgctcgggcggctcaccgacgtcggctggggcaaccggctg
cgggagctcgtcgggccgcaggcgaacgacgccgaggtgccggactcggtgttcaaggcg
tgcgtgcaggtgctcgccggctggcaatgggcgcaacggccggtggcggtcgtcgcggtg
ccgtcgtccacgcggccgcaactggtgtacagcctcgcgacccggctggccgagatcggc
aagctggacttcctcggcgcgctcgatgccgaggggccaccgccgcgccaggcgaacagc
gcacagcggctggccgacctgtggcggcggatgagcatgcccgcggacctcgcggcggtc
ctgccgtccggaccggtcctgctggtggacgacgtcatcgacaccggctggacgatgacg
ctcgccgcgcggctgctgcggcgggccggggcgcccgcggtgctgccgttcgcgttggcc
agcacggcctga
DBGET
integrated database retrieval system
