| Entry |
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| Symbol |
phrB
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| Name |
(GenBank) deoxyribodipyrimidine photo-lyase
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| KO |
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| Organism |
amm Amycolatopsis mediterranei S699
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| Brite |
KEGG Orthology (KO) [BR:amm00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:amm03400]
AMES_8295 (phrB)
Enzymes [BR:amm01000]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AMES_8295 (phrB)
DNA repair and recombination proteins [BR:amm03400]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AMES_8295 (phrB)
Prokaryotic type
AMES_8295 (phrB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(9272462..9273808)
|
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| AA seq |
448 aa
MTREAPVVLWFRRDLRLGDHAALLEASRHSKHVLALYVLDEALLKPGGAPREAFLYGCLE
KLNEQLGGRLMLVRGEPAAEVVKAAKKIGAAAVHVSADTGPYGRRRDASVAKALAEHNIE
WVETGSSYAVTPGRVTKPDGSPYRVFTPFFRAWTARGWHSPADTGPSLVDWVEPPRSLKI
PKAPAVSATLPEPGEQAALDVWHEFLDDGIETYDEDRDRPDREGTTRLSPYLRWGCIHPR
TILADLAGDDRVGAKSLRSEICWREFHADVLWHRPETARENYDHRFDGMKYDDDREAFER
WCAGRTGYPIVDAGMRQLLAEGWMHNRVRMVVASFLVKDLHLPWWLGARHFMKHLVDGDL
ASNQLNWQWVAGCGTDAAPYFRIFNPTTQGEKFDPAGDYVRKYVPELRSVPGKAVHQLKD
RPEGYPEPMVDHAHERQVSLERYGKITS |
|---|
| NT seq |
1347 nt +upstreamnt +downstreamnt
gtgactcgagaagcgccggtcgtcctgtggttccgccgtgacctgcggctcggcgaccac
gccgcgctgctggaggcgtcgcgccacagcaagcacgtgctcgcgctgtacgtcctcgac
gaagcactgctgaagcctggtggcgcgccgcgggaagcgttcctctacggctgcctggag
aagctgaacgagcagctcggcggccggctgatgctggtccgcggcgaaccggcggccgaa
gtcgtgaaggcggcgaagaagatcggtgcggccgcggtgcacgtcagcgccgacaccggg
ccctacggtcgccgccgggacgcttcggtggcgaaagcgttggcggagcacaacatcgag
tgggtcgagacgggctcgtcgtatgccgtgacgccgggccgcgtcaccaagccggacggc
agcccgtaccgcgtcttcacgccgttcttccgcgcctggaccgcccgcggctggcattca
cccgccgacaccggtccgtcccttgtggactgggtggaaccgccgcggtcgctgaagatc
ccgaaggcgcccgccgtctccgcgacgctgcccgagcccggcgagcaggccgcactcgac
gtctggcacgaattcctggacgacggcatcgagacctacgacgaggaccgcgaccggccg
gaccgtgaaggcaccacccggctgtcgccgtacctgcgctggggctgcatccacccgcgg
acgatcttggccgacctggcgggtgacgaccgcgtcggcgcgaagtcgctgcgcagcgag
atctgctggcgcgagttccacgccgacgtcctgtggcaccgcccggaaaccgcgcgtgag
aactacgaccaccgcttcgacgggatgaagtacgacgacgaccgcgaggccttcgagcgg
tggtgcgcgggtcgcaccggttacccgatcgtggacgccgggatgcggcagctgctggcc
gagggctggatgcacaaccgggtgcggatggtcgtcgcgagcttcctggtgaaggacctg
cacctgccgtggtggctgggcgcccgccacttcatgaagcacctggtggacggcgacctg
gcgtcgaaccagctgaactggcagtgggtcgcgggctgcggcaccgacgcggcaccgtac
tttcgcatcttcaacccgacaacccagggcgagaagttcgacccggccggcgactacgtg
cgcaagtacgtgccggagctgcgctcggtgcccggcaaggcagtgcaccagctgaaggac
cgccccgagggatacccggaacccatggtcgaccacgcccacgagcgccaggtgtccttg
gaacggtacggcaagatcacctcgtga |
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