Amycolatopsis mediterranei S699: AMES_8702
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Entry
AMES_8702 CDS
T02190
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
amm
Amycolatopsis mediterranei S699
Pathway
amm03030
DNA replication
amm03430
Mismatch repair
amm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMES_8702 (dnaN)
03430 Mismatch repair
AMES_8702 (dnaN)
03440 Homologous recombination
AMES_8702 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amm03032
]
AMES_8702 (dnaN)
03400 DNA repair and recombination proteins [BR:
amm03400
]
AMES_8702 (dnaN)
Enzymes [BR:
amm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMES_8702 (dnaN)
DNA replication proteins [BR:
amm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMES_8702 (dnaN)
DNA repair and recombination proteins [BR:
amm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMES_8702 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_3
DNA_pol3_beta
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
AFO82234
LinkDB
All DBs
Position
9701126..9702187
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AA seq
353 aa
AA seq
DB search
MDVTAPAHRLSAAVSAASRLLPARAGLRLEAAAAGLTVAGVASDLAVRFGCPATTHTDGS
VVVPAAPLVETLKVLDTELVRLVVEGSRLALRLDNARFALPLLPESGAVSDPPAKVSEVD
GAAFASALRIVAGTAAKDDPLPLFTGVRVQAAGAGLTLTASDRYRMAVARLPLSSPGSLD
VLVPAALLSEAARQARGRVGLHVGPGRFGVSWPEGLVATAVLDAGFLSEDSIPSGTVDTT
VSLPADALAAAVRRVGVYAEDRRVLTLEVGDAQVRLASARQDTGEAEETLKADVSGGRTS
PSFQARYLLDALAAFAGEQVVLSIQPGMRACILRAAEPGEVALAYYLMPMLPR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaccgcgcctgcccaccgcctctcggcggccgtctccgccgcgtcacgcctg
ctgcccgcccgcgccgggctgcggttggaggcggccgcggccgggctgacggtcgccggt
gtcgcgtcggacctcgccgttcggttcggctgccccgcgaccacgcacaccgacggttcg
gtcgtcgtccccgcggccccgctggtggagacgctgaaggtgctcgacacggagctggtc
cgcctggtcgtcgaaggctcgcgcctggcgttgcggctggacaacgcccggttcgcgctg
ccgctgctgcccgaatccggtgcggtttcggacccgcccgccaaggtgtccgaagtggac
ggagcggcgttcgcctcggcgttgcggatcgtcgcgggcacggcggcgaaggacgacccg
ctgccgctgttcacgggggtccgcgtgcaggccgccggcgccggcctgacgctgacggcg
tccgaccgctaccggatggcggtggcgcggctgccgctgtcttcgccgggttcgttggac
gtcctggtcccggcggccctgctgtcggaagcggcccggcaggcgcgtggccgggtgggc
ctgcacgtgggcccgggccggttcggggtgagctggccggaaggcctggtcgcgacggcg
gtcctcgacgcgggcttcctgtcggaggactcgatcccctcgggcacggtggacaccacg
gtgagccttccggcggacgccttggcggcggccgtccgccgggtgggggtgtacgcggag
gacaggcgcgtgctgacgctggaggtcggcgacgcccaggtccggctggcgagcgcgcgg
caggacacgggcgaggcggaggagacgctgaaggccgacgtcagcggcgggcggacgtcg
ccgtcgttccaggcgcggtacctgctggacgcgttggcggcgttcgcgggcgagcaggtg
gtgctgtcgatccagccggggatgcgcgcgtgcatcctgcgggccgcggagcccggggag
gtggcgctggcgtactacctcatgccgatgctgccccggtag
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